Mangrovibacter phragmitis: MPHASIOC01_001647
Help
Entry
MPHASIOC01_001647 CDS
T10640
Symbol
rcsA
Name
(GenBank) transcriptional regulator RcsA
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
mphg Mangrovibacter phragmitis
Pathway
mphg02020
Two-component system
mphg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MPHASIOC01_001647 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MPHASIOC01_001647 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mphg03000
]
MPHASIOC01_001647 (rcsA)
Transcription factors [BR:
mphg03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
MPHASIOC01_001647 (rcsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
HTH_40
Motif
Other DBs
NCBI-ProteinID:
XCE76722
LinkDB
All DBs
Position
1729245..1729871
Genome browser
AA seq
208 aa
AA seq
DB search
MSTIIMDLCSYTRLGLTGYLASRGVKKRHILNVENVGELAVSCQSAQPNVVFINEDCFIH
DAESSQRIKQIINQYPSTLFIVFMAIANIHFDEYLRVRKNLLISSKSIKPEALDSIIGDY
LATENQCITQISVPTLSLSRTESHMLKMWMSGQDTIQISDQMNIKAKTVSSHKGNIKKKI
KTHNKQVIYHVVRLADNVTNGIFVNMRS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaattatcatggacttatgtagctatacccggctagggctcactggttacctc
gccagtcggggggtaaagaagcgacatattttgaatgttgaaaatgtcggtgaacttgcc
gtctcttgccagtccgcccagcctaatgtggtatttataaatgaagattgttttattcat
gatgcagaaagtagccaacggataaagcagatcatcaatcaatatccatccacactgttt
attgtgttcatggccattgccaatattcattttgacgaatatttgcgcgttcggaaaaac
ttattgattagttctaaatcaattaagcctgaagcactggacagcattattggtgattat
ttagcaaccgaaaatcagtgtattacacagatatccgttcctactttatcgttaagccgc
actgaatcccatatgttaaaaatgtggatgtccgggcaggataccattcaaatttctgat
cagatgaatatcaaggctaagacagtctcatcccacaaagggaatattaagaagaagatt
aaaacacacaataagcaggtgatttatcatgtagtacgtctggctgataacgtcacaaat
ggcatttttgttaatatgcgctcgtag
DBGET
integrated database retrieval system
