| Entry |
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| Symbol |
srmB
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| Name |
(GenBank) ATP-dependent RNA helicase SrmB
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| KO |
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| Organism |
mphg Mangrovibacter phragmitis
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| Brite |
Enzymes [BR:mphg01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MPHASIOC01_002860 (srmB)
Ribosome biogenesis [BR:mphg03009]
Prokaryotic type
rRNA helicases
MPHASIOC01_002860 (srmB)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
2987200..2988552
|
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| AA seq |
450 aa
MTVTTFSELELDESLLDALQDKGFTRPTAIQAEAIPPALEGRDILGSAPTGTGKTAAYLL
PVMQHLLDFPRKKSGPPRVLILTPTRELAMQVAEHAKELAAHTKLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEMLILDEADRMLDMGFAQDIEHISGETRW
RKQTMLFSATLEGQAIKDFAERLLEDPAEVSATPSVRERKKIHQWYYRADNVEHKTALLV
NLLGQPDVTRSIVFVRKRERVHELAGWLRDAGIQTCYLEGEMVQAKRNEAIKRLTDGRVN
VLIATDVAARGIDIPDVSHVFNFDLPRGSDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKIERYIQEPLKSRIIEELRPTTRTPSDKLKGKPSKKVKARREEKKKEQDKTKGRVKQRH
RDTKNVGKRRKPAAAAKQASPEAEGTDKQS |
|---|
| NT seq |
1353 nt +upstreamnt +downstreamnt
atgactgtaaccactttttccgaactcgaacttgatgaaagcctgctggatgcactccag
gataaaggctttactcgcccgacagctattcaggctgaggcaattcctcctgcactggag
gggcgcgatatcctgggctctgcaccaactggaaccgggaagactgcggcttacttactg
ccggtgatgcaacatctgctcgattttccgcgtaaaaagtccgggcctcctcgggtgttg
atcctcactccgactcgcgagctggctatgcaggttgcagagcatgccaaagagctggct
gcccatacaaagctggatattgccaccattactggcggcgtcgcttacatgaaccacgca
gaagtattcagtgaaaaccaggacattgttgtcgcaacgactggccgcctgctgcaatac
attaaagaagagaatttcgactgtcgcgccgttgaaatgctgattctcgatgaagcagac
cggatgctggatatggggtttgcccaggatattgagcatatatcaggtgaaactcgctgg
cgtaaacaaaccatgttgttttccgccacccttgaagggcaggcgataaaagattttgct
gaacgtttacttgaagacccggccgaagtgtctgccaccccatccgttcgtgagcgtaaa
aaaatacaccagtggtattaccgcgctgacaacgttgagcataaaactgcgttgctggta
aacctgctgggtcagcctgatgttacacgttctattgtttttgtgcgtaagcgtgagcgt
gtgcatgagttagccgggtggctgcgtgatgccggaattcaaacctgttatctcgaggga
gaaatggttcaggctaaacgtaatgaagcaatcaaacgcctgaccgatggccgggttaat
gtgcttattgctacggatgttgccgctcgcggtattgatattcctgatgtcagccatgta
tttaacttcgacttaccgcgagggagcgacacttatcttcaccgcattggcagaaccggc
cgcgccgggcgcaaagggacagctatttcgttagttgaagcgcacgaccatttattgctg
ggcaaaattgagcgttatattcaggagccactcaaatcgcgcattattgaggagctcagg
ccgaccacgcgaaccccgagtgacaaactgaaagggaaaccgtccaaaaaggttaaagct
cgccgtgaagagaagaaaaaagagcaggataaaacaaaagggcgagtgaagcagcgccac
cgtgacaccaaaaatgtgggtaaaaggcgcaagccagccgctgctgctaaacaggcttca
ccggaagcagaaggcactgacaaacagtcataa |
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