Mangrovibacter phragmitis: MPHASIOC01_003226
Help
Entry
MPHASIOC01_003226 CDS
T10640
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mphg Mangrovibacter phragmitis
Pathway
mphg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MPHASIOC01_003226 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphg03400
]
MPHASIOC01_003226 (recB)
Enzymes [BR:
mphg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MPHASIOC01_003226 (recB)
DNA repair and recombination proteins [BR:
mphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MPHASIOC01_003226 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
XCE73169
LinkDB
All DBs
Position
complement(3351743..3355297)
Genome browser
AA seq
1184 aa
AA seq
DB search
MLAHHNNPTALDPMRLPLAGARLIEASAGTGKTYTIAALYLRLLLGLGGEAAFVRPLPVE
SILVVTFTEAATEELRGRIRSNIHELRIACVRKSSNNPLYQQLLAEISDKKQAARILLLA
ERQMDEAAIFTIHGFCQRMLSLNAFESGMPFEQQLIEDETELRQRACADFWRRYCYPLNK
PVAQAVSEIWPGPQALLREIGRYLSGDAPVLKQPVNEDETLQARHDTIIHAIDTLKAQWR
GSSGDIPDIIENSAIDRRKYNRKNQGIWFDAVETWAASPTENYTFPEALARFSQSFLYER
TKAEGNPPEHALFSAIDVFLSQPLTIRDLVIARALADIRYTVTQEKRYRGELGFDDMLSR
LDQALAQPEGDNLAAAIRGRFPVAMIDEFQDTDPQQYRIFRHIWLGQAETALLLIGDPKQ
AIYAFRGADIFTYMKARGEVSAHYTLETNWRSSPAMVNSVNQLFSHLENPFMFEQIPFLP
VNAAPRNQGVRFVLNGETQPAMSVWLMPGEGCGVMEYQQTMARQCACQIRDWLVAGAAGN
AVLEREEKTRPVTATDITVLVRSRQEAALIREALSLLGIQSVYLSNRDSVFSTQEAQDIL
RVLQAVLNPENEAAMRSALATSLLGLDAATLEQLSQNETAWDNLVDEFVGYRQCWFKRGV
MPMLRSLLAHRHLSENILASQDGERRLTDIMHVSELLQEAAATADSEHALVRWLSQRIAE
PDDNASSQQLRLESDRHLVQIVTIHKSKGLEYSLVWLPFIANYRAQAEGLYHDRQTFEAI
LDLHNEKTSLELAEAERLAEDLRLLYVAVTRAIWHCSLGIGPLFRGNRAKKGASDFHLSA
PGRLIQQAQPCDSGELRQSLEQLCRGDIALKDIDLSDETPWSPPALSAENLAAREVTRTF
TDFWRVTSYSGLQQHGSSAGQALLPRLDIDAIGTVSSSGEQALTIHTFPRGAVPGTFLHS
LFEQLDFTQPVDAEWLEQQLLSAGYGAEWLPVLLPWLDALLCAPLTEEGLSLNVLSAQDK
RVEMEFYLPVDTLLAPDELDALIRQYDPLSARSPALDFQQVRGMLKGFIDLTFRWQGRYY
LLDYKSNWLGSTSEAYTPEAMAQAMCEHRYDLQYQLYTLALHRYLRHRMPDYEYQHHFGG
VIYLFLRGVEPGLPGNGIFTTRPDEQLVSAMDTLFAGQSEEVVK
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgcatcataataatccgactgcccttgacccaatgcgtttacccctggcaggg
gcacgcttaattgaggcgtcagctggtaccggaaaaacttataccatcgccgctctttat
ttgcgcctgttgttgggcctggggggcgaggcggcttttgtgcggccactacctgtggaa
tctattctggtggtgacatttactgaagccgctacagaagagttacgtgggcgtatacgt
agcaatattcatgagttgcgtatcgcttgtgtacggaaaagcagtaacaacccgctatac
cagcaattgctggctgaaatcagtgacaaaaaacaggccgcccgaatattactccttgct
gaaaggcagatggatgaagccgctattttcaccattcatggtttttgtcagcggatgctg
agcctgaatgcattcgaatcaggtatgccgtttgaacaacaactgattgaagatgaaaca
gagttacgccagagagcctgtgctgacttttggcggcgctactgttacccgctgaataaa
cccgttgctcaggcggtcagcgaaatatggccagggcctcaggcgctgctgcgcgagatt
gggcgttacctgtctggcgacgcgcctgtgctgaagcaaccagtgaacgaagatgaaacc
cttcaggcacgccatgatacgattattcatgccattgatactctgaaagctcagtggcgg
ggctcctctggcgatattcccgatatcattgaaaattccgccatcgacaggcgtaaatat
aaccgtaaaaaccaggggatctggtttgatgctgttgaaacctgggcggcaagcccaaca
gaaaactatacctttccagaggcactggctcgcttctcacagtcctttctttatgaacgt
actaaagcagaaggtaatccgcctgagcacgcgctgttttccgctattgatgtttttctt
tctcagccactgactattcgcgatttggttattgcccgtgcacttgcggacattcgttac
actgttacgcaggaaaagcgttaccggggtgagctggggttcgacgatatgctaagtcgc
cttgaccaggcactggcacaaccggaaggtgacaacctggctgcggctattcgtgggcgc
ttcccggttgcaatgattgatgagtttcaggatacagacccacaacaataccgtattttc
cgtcatatctggctggggcaggctgaaacagcgctgttactgattggcgacccgaaacag
gccatctacgcgtttcgtggcgcggatatttttacctatatgaaagctcgcggggaagtt
agtgctcactatacgttggagactaactggcgctcatctccggcgatggttaatagtgta
aatcagctgttcagccaccttgaaaatccgttcatgtttgagcagatcccctttctaccg
gtcaacgccgcaccgcgtaaccagggcgtgcgttttgtgctcaatggggagactcaaccg
gcgatgtccgtctggttaatgcctggcgaaggttgtggggtgatggagtaccagcaaacc
atggcacgtcagtgtgcttgccagattcgtgactggcttgtggctggtgcggctggtaac
gctgtactggaacgtgaggagaaaacgcgcccggtcaccgccacagatataacggtactg
gtgcgcagccgtcaggaagcagcattaatacgagaagcgctgagtttattggggattcag
tctgtctatctctctaaccgcgacagcgttttcagtacccaggaggcgcaggatatttta
cgtgtcctgcaggcagtgcttaacccggaaaacgaagcagccatgcgcagcgcactggca
accagcctgttggggctggatgcagcaacccttgagcagttatctcagaatgaaacggcc
tgggataatctggttgatgaatttgttggttaccgccagtgctggtttaagcgtggggtg
atgccgatgttgcgctctttactggctcacagacatctgtcggaaaacattctcgcaagc
caggacggtgaacgccgcctgaccgatattatgcatgtcagtgagttattgcaggaagcg
gcggctacggcggacagtgagcatgcgctggtgcgctggttatcgcaacgtattgccgaa
ccggatgacaacgccagcagccagcaactccgcctggaaagtgacagacacctcgttcag
attgtgacaattcataagtcaaaagggcttgagtactcgctggtgtggttgccatttatt
gccaattaccgcgcgcaggccgaagggctatatcacgaccgccagacattcgaagcgata
ttagatttacataatgaaaaaaccagccttgagctggcagaagctgaacggctggccgaa
gatttgcgtctgctctatgttgcggtcacccgggctatatggcactgcagtctgggaatt
ggtccccttttccgaggcaacagggccaaaaaaggcgcatctgatttccatctgagtgcg
ccggggcgtctgattcagcaggcgcaaccttgtgactccggggagctcaggcagtccctg
gagcagttatgcaggggcgatattgccttaaaagacattgaccttagcgacgaaacgccc
tggtcccccccggcattgtcggcagagaatctggctgcccgtgaggtaacaagaacattc
actgatttttggcgtgtgaccagctattccgggctacagcaacatggttcatcggccggg
caggctttgttaccccgtttggatattgacgccatagggaccgtctcttcctccggtgag
caagcacttaccatccatacgttcccgcgtggggcagtgcctggtacttttcttcacagt
ctgtttgaacaactggatttcacccagccagtggatgccgaatggctggagcagcaatta
ctttccgcagggtatggcgctgagtggctgccagttttattaccctggcttgatgcattg
ctttgcgcgccactgacggaagaggggttaagcctgaatgtgttatctgcgcaagataaa
cgggttgaaatggaattctacctgcctgttgatacgcttctggcccccgatgaacttgat
gcgttgattcgccagtatgatcctctgtcggcacgttctccggccctggattttcagcag
gtgcgcggcatgctgaagggctttattgacctgacattccgctggcagggccgctattat
ttgctggactacaagtccaactggttaggcagtaccagcgaggcatacacccctgaagct
atggcccaggcgatgtgtgaacatcgctatgatctccagtaccagttgtatacgctggct
ctgcatcgttacctgcgccaccggatgcctgattacgaatatcagcaccattttggtggg
gttatttacctctttctacgtggtgttgaacccggtttgcctggaaatggcatttttacc
accaggccagatgaacaactggtatctgcaatggatacattgtttgccgggcagagcgag
gaggttgtgaaatga
DBGET
integrated database retrieval system
