Mangrovibacter phragmitis: MPHASIOC01_003668
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Entry
MPHASIOC01_003668 CDS
T10640
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mphg Mangrovibacter phragmitis
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mphg03016
]
MPHASIOC01_003668 (truB)
Enzymes [BR:
mphg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MPHASIOC01_003668 (truB)
Transfer RNA biogenesis [BR:
mphg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MPHASIOC01_003668 (truB)
Prokaryotic type
MPHASIOC01_003668 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PLAC9
Motif
Other DBs
NCBI-ProteinID:
XCE73564
LinkDB
All DBs
Position
complement(3799651..3800595)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPHGLSSNDALQKVKRLFNANRAGHTGALDPLATGMLPVCLG
EATKFSRYLLDSDKRYRVIARLGQRTDTSDADGTVVQERPVTFSESDLLQALESFRGETQ
QVPSMFSALKYQGRPLYEYARQGIEVPREARAITVYELLFIRHEGNELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVAFLRRLAVSKYPVERMVTLEHLNTLVAKAQEEGSGIEAVLDPL
LMPMDSPAADFPQVNLQPAVAAYFKQGQPVRVAGVPSDGLVRVTEGETGEFIGMGEIDDE
GRVAPRRLVVHYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcggcgtgggcgtgatgtccatggtgttttattgctggataaaccg
catggactgtcatcaaatgatgcgctgcaaaaagtaaaacgcctctttaatgctaatcgg
gcaggtcacacaggggcgctggatccactggctacgggcatgctgcctgtttgtcttggt
gaagcaaccaagttttcccgttatctgttagattcagacaagcgttaccgtgtaattgcc
cggcttgggcagcgtaccgatacttctgatgccgacggaactgtggttcaggagcgcccg
gtcaccttcagtgaatctgatcttcttcaggcgctggaaagctttcgcggtgaaacacaa
caagtgccatccatgttctctgcactcaagtaccaggggcggcctttgtatgaatatgct
cgccagggtatcgaagttccccgtgaggcgcgtgctattactgtgtatgaattgctgttt
atccgccacgaaggtaatgaactggagctggaagtacactgctctaaaggaacttacatt
cgcacaatcattgatgatcttggcgaaaaactgggttgtggtgcgcatgttgcctttttg
cggcgtttagctgtcagtaaatacccggtcgagcgcatggtgacccttgagcacctgaat
acactggtcgcgaaagcccaggaagaaggctcgggtattgaggcggtactggaccctctg
ctgatgccaatggacagcccggcagccgacttcccccaagtgaatctgcagcccgctgtt
gcggcatatttcaaacaagggcagccggtcagggttgctggggtaccttctgacggtctg
gttcgcgttaccgaaggcgagactggtgaatttatcggtatgggtgaaattgatgacgaa
ggccgtgttgcgccgcgtcgtttggttgttcattatccggtatag
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