Mangrovibacter phragmitis: MPHASIOC01_004594
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Entry
MPHASIOC01_004594 CDS
T10640
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mphg Mangrovibacter phragmitis
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphg03400
]
MPHASIOC01_004594 (radA)
DNA repair and recombination proteins [BR:
mphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MPHASIOC01_004594 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DnaB_C
DUF7125
Lon_C
GvpD_P-loop
RecA_N
AAA_22
Rad51
nSTAND_NTPase5
ABC_tran
SLFN-g3_helicase
AAA_14
AAA_16
NTPase_1
nSTAND3
AAA_24
AAA
AAA_5
cobW
Zeta_toxin
Herpes_Helicase
DZR
AAA_29
Viral_helicase1
PAXNEB
MMR_HSR1
Zn_ribbon_Thio2
Motif
Other DBs
NCBI-ProteinID:
XCE74408
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Position
complement(4790189..4791580)
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AA seq
463 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRIAASPQVARNEKLSGYAGNAGV
SKVQKLSEISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
EQMKTLYVTGEESLQQVAMRAHRLGLPGSNLNMLSETSIEQICLVADQEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRYAKMRGVAVIMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGMREVSNPSAIFLSRGDELTSGSSV
MVVWEGTRPLLVEIQALVDQSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVAETSVDLALLLAIVSSLRDRPLPQDLVVFGEVGLSGEIRPVPSGQERITEAS
KHGFRRAIVPHANVPKRPPAGMEIFGVKKLADALAVFDDLFVT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcaccgaaaagagcgtttgtctgtaatgagtgtggtgcggattacccgcgc
tggcaggggcagtgcagtgcatgccatgcctggaataccattaccgaggtgcgaatagcg
gcatcgcctcaggttgcccgcaatgaaaaactttcaggctatgcgggcaatgctggtgtc
agtaaagtgcaaaagctgtcggaaatcagcctggaggagctaccccgtttttctacgggc
tttaaagagttcgaccgggttttgggtggcggtgtggtgccgggaagcgccattttaatt
ggtggtaatcctggtgcggggaaatccaccctgttactgcaaaccctgtgcaaactcgct
gaacaaatgaaaacgctgtatgtcaccggggaagagtcgctccagcaggtggccatgcgt
gcccatcgcctggggttgcctggcagcaatctgaatatgctgtcagaaaccagcattgaa
cagatttgcctggtggctgaccaggagcagccaaaactgatggttattgactccattcag
gtgatgcatatggcggatattcagtcatcaccaggcagtgtggctcaggtgcgggaaaca
gccgcgtatttgacgcgctatgcgaagatgcgtggggtggcagtgattatggtggggcat
gtaacgaaagatggctcgctggccggtccaaaagtgctggagcactgtattgactgttct
gtgttgctggatggcgatgcagactcgcgttttcgtacattgcgcagccataaaaatcgc
tttggtgctgtaaatgagctgggtgtttttgccatgactgagcaggggatgcgcgaagtg
agcaacccgtcagcaattttcctcagccggggtgatgagctgacgtcaggcagttctgtg
atggtggtttgggaaggtacccgtccactactggtagaaatccaggcgctggtggatcag
tctatgatgtcaaacccgcggcgggttgctgtcgggcttgaacaaaaccgcctggcgatt
ttgctggctgtgctgcaccgccacggtgggttacaaatggcagaccaggatgtatttgtt
aatgtggttggcggcgtaaaagttgcagaaaccagtgttgatttggcactcttgctggcg
attgtttccagcctgagagatcgcccgttgccgcaagacttggtggtgtttggcgaggtt
ggcctttccggggagattcgcccagtgccaagtggacaggagcgtatcactgaagcgtct
aaacatggttttcgccgggcgattgttccccacgccaatgtgccaaaacgcccacctgcg
ggaatggaaatctttggtgtaaaaaaactggcggatgcgctggctgtatttgatgatttg
tttgtcacataa
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