Mangrovibacter phragmitis: MPHASIOC01_005225
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Entry
MPHASIOC01_005225 CDS
T10640
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mphg Mangrovibacter phragmitis
Pathway
mphg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPHASIOC01_005225 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mphg03019
]
MPHASIOC01_005225 (recQ)
03400 DNA repair and recombination proteins [BR:
mphg03400
]
MPHASIOC01_005225 (recQ)
Enzymes [BR:
mphg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPHASIOC01_005225 (recQ)
Messenger RNA biogenesis [BR:
mphg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPHASIOC01_005225 (recQ)
DNA repair and recombination proteins [BR:
mphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MPHASIOC01_005225 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
XCE74965
LinkDB
All DBs
Position
complement(5471958..5473787)
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AA seq
609 aa
AA seq
DB search
MAQAEMMNRESLAQQVLQETFGYQQFRPGQQTIINTALQGRDCLVVMPTGGGKSLCYQIP
ALVLGGLTLVVSPLISLMKDQVDQLCANGVAAACLNSSLSREDQQQVIDGCRNGQIRLLY
IAPERLMMDNFLDHLARWNPVMLAVDEAHCISQWGHDFRPEYAALGQLRQRLPGVPFMAL
TATADDTTRLDIARLLGLDDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISARAYHAGLENSVRAEVQEKFQRDDVQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLDEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEACGNCDICLDPPRRYDGLVDAQKAL
SCIYRVNQRFGMGYVVEVLRGANNQRIRDMQHDKLPVYGIGREHSHEHWVSVIRQLIHMG
FITQNIANHSALQLTEAARPVLRGEVPLMLAVPRITVLKPRAHQKTFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQLPVSPGEMLSVNGVGMRKLERFGQPFMTLIR
EHLDERETW
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaaatgatgaatcgggagtcactggcacaacaagtgttacaggagacc
tttggctaccaacagtttcgtccgggccagcaaaccattattaatacggcacttcagggc
cgtgactgtctggtcgttatgccgaccggcgggggaaaatccctctgttaccaaattcct
gcgctggtgcttggcgggttgacgctggttgtctctccgcttatctctttgatgaaagat
caggtggatcaactgtgcgccaacggggttgccgctgcctgcctgaattcctcattaagc
cgtgaagaccaacaacaggttatcgatgggtgcagaaacgggcaaatacgcctgctgtat
atcgccccagaacgcctgatgatggataacttcctcgaccacctggctcgctggaaccca
gtcatgctggcagttgatgaagcccactgtatttcccaatgggggcacgatttccgcccg
gaatatgcagcccttgggcaactgcgccagcgtcttcctggtgtgccgtttatggcgttg
acggccacggcagacgataccacccggcttgatattgcgcgtttattggggctggatgac
ccgcttatccaggtgagcagttttgaccggccgaatattcgctacatgttaatggagaag
ttcaagccgcttgaccaactgctgcggtatgttcaggagcaacggggaaaatccggcatt
atttactgcaacagccgggcaaaagtggaagacacagcagcccgcctgcaaagccgtgga
ataagcgcgcgtgcctaccatgccgggctggaaaatagtgtgcgtgcagaggtacaggag
aagttccagcgcgatgatgtgcaaattgtggtggctaccgtagccttcggtatggggatt
aataaacccaatgtgcgctttgttgtccatttcgacattccacgcaatatcgagtcgtat
taccaggaaaccgggcgcgccgggcgggatgggctgcctgcggaagcgatgctgttttac
gaccctgcagatatggcctggctacgccgttgtctggatgagaaaccagcagggcagttg
caggatattgaacgccataaactgaacgctatgggggcctttgccgaggcacaaacctgc
cgccgcctggttctgttgaattattttggtgaaggtcgccaggaagcatgcggcaactgt
gatatttgcctggatcctccacgccgttatgatggcctggtggatgcgcaaaaagcgtta
tcctgtatttatcgtgttaatcagcgttttgggatgggttatgtggtggaggtattgcga
ggcgccaacaatcagcgtattcgtgatatgcaacacgataaactgcctgtgtatggcatt
gggcgtgagcatagccacgaacactgggtaagcgtaattcgccagctcatccatatgggg
tttattacccaaaacattgccaaccattctgctctgcaactgactgaagcggcccggcct
gtattgcgtggtgaggtgccattaatgctggctgtgcctcgtattactgttctgaaaccg
cgtgctcaccaaaaaacctttggcggtaattatgaccgcaagttgtttgccaaattacgc
aagctgcgtaaagccattgccgatgaagaaaacattccaccgtatgtcgtctttaacgat
gcaacgttgatagaaatggcggagcagttacccgtttcaccaggggaaatgttgagcgta
aatggcgtgggaatgcgtaaactcgagcggtttgggcaaccctttatgaccctgattcgt
gaacatctggacgaacgggaaacctggtag
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