Mangrovibacter phragmitis: MPHASIOC01_005232
Help
Entry
MPHASIOC01_005232 CDS
T10640
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mphg Mangrovibacter phragmitis
Pathway
mphg03420
Nucleotide excision repair
mphg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPHASIOC01_005232 (uvrD)
03430 Mismatch repair
MPHASIOC01_005232 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphg03400
]
MPHASIOC01_005232 (uvrD)
Enzymes [BR:
mphg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPHASIOC01_005232 (uvrD)
DNA repair and recombination proteins [BR:
mphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPHASIOC01_005232 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MPHASIOC01_005232 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DUF6658
Motif
Other DBs
NCBI-ProteinID:
XCE74972
LinkDB
All DBs
Position
complement(5478671..5480833)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENSSPYSIMAV
TFTNKAAAEMRQRIGQLMGSVQNGMWVGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQAMWYINGKKDEGLRPQHVESYGNPVEQTWLKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRDRFTHILVDEFQDTNNIQYAWIRLLAGDT
SHVMIVGDDDQSIYGWRGAQVENIQRFLRDFPGAQTIRLEQNYRSTSNILNAANALIDNN
TGRLGKNLWTDGSEGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQGSMPYRIYGGMRFFERQEIKDALAYLRLMSNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRENQLTLWQASRQLLQDKALAGRAASALQRFMELIDALAHDTAEMPLHVQ
TDRVIKDSGLWMMYEQEKGEKGQTRIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAESRRLYGKEVYHRPSRFIGELPENCVEEVRLRATVSRPVNHQRLG
TPIEQNDSGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagtcttaatgataaacagcgtgaagccgttgcggca
ccacgcagtaatttgctggttctggcaggtgcgggaagcgggaaaacacgagtgttggtg
catcgtatcgcctggctgatgtcggttgagaatagctcgccttactccattatggctgtc
acctttaccaataaagcggccgcagaaatgcgccagcgtattggtcaattgatgggaagc
gtgcaaaatggcatgtgggttggcactttccacggcctggcacaccgcctgttgcgcgcg
catcaccttgatgctggcttgccacaggattttcaaattctggatagcgaagaccagcta
cgcctgctcaaacgcctgatcaaagccatgaaccttgatgaaaagcagtggcctgcccgc
caggccatgtggtacatcaacggcaaaaaagacgaaggcctgcgcccacaacatgtagaa
agctatggcaacccggttgagcaaacctggttgaaggtttaccaggcttatcaggaagcc
tgcgacagagccgggctggtggattttgctgaattactgctgcgcgcccatgagctttgg
cttaataagccccatattctccaacactatcgtgatcgcttcacacacattttggtggac
gaatttcaggataccaacaacattcagtatgcctggattcgcctgctggcgggtgatacc
agccatgtaatgatcgttggggatgatgaccagtcaatttatggctggcgtggtgctcag
gtggaaaatattcagcgctttctgcgggatttcccgggggcgcaaaccattcgccttgag
caaaactaccgttcaaccagcaatattctgaacgcggctaacgccctgattgataacaac
acagggcgccttgggaaaaacttgtggactgacggcagcgaaggtgagcccatttcgctg
tactgcgccttcaatgaactggatgaagcccggtttgttgtcaaccgtatcaaaacctgg
caggacaatggcggtgcactggaacagtgtgccatcttatatcgcagcaacgcccagtcg
cgcgtgctcgaagaggctttattgcagggcagcatgccgtaccggatttatggcggtatg
cgcttctttgaacgccaggaaattaaagatgcgctggcgtacttgcgcctgatgagtaac
cgtaatgatgacgcggcatttgagcgtgtggttaatacacccacccggggaataggcgac
cgcactctggatgttgtgcgccagacatccagagaaaaccagctcacgctatggcaggct
tcacgccagctcttacaggataaagccctggccgggcgcgctgcgtctgccctgcagcgt
tttatggaactaattgatgcactggctcacgataccgcagaaatgcccctgcatgtccag
actgaccgggtgattaaagattctggtttgtggatgatgtatgagcaggaaaaaggcgaa
aaagggcagacgcgtattgaaaaccttgaggaactggtgacagccacacgccagttcagc
taccaggacgaagacgaagatttaatgccgttacaggccttcttgtctcatgctgcactg
gaggcaggagaagggcaggcagatacctggcaggacgcagtacaactgatgacactgcat
tcagcgaaaggtctggagttcccgcaagtgtttattgtcgggatggaagaagggatgttc
cccagccagatgtcgctggatgaaggcggtcgcctggaagaagaacgccgcctggcttat
gttggtgtcacgcgggccatgcaaaagcttacgctgacttatgcagaatcgcgccgactg
tacgggaaagaggtgtatcaccgcccttcccggttcattggcgaactaccggaaaactgt
gtggaggaagtgcgtttacgtgcgacggtttcccgcccggttaatcaccaacggctgggt
acgcccattgagcaaaacgatagtggctataagctgggccagcgggtacgccatcctaaa
tttggtgagggaactattgtgaacctggaaggtagtggtgagcacagccgcttgcaggtg
gcattccagggccagggcattaagtggctggttgccgcttacgccaggctcgaaacggtg
taa
DBGET
integrated database retrieval system
