Mangrovibacter phragmitis: MPHASIOC01_005261
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Entry
MPHASIOC01_005261 CDS
T10640
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mphg Mangrovibacter phragmitis
Pathway
mphg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mphg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPHASIOC01_005261 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mphg03021
]
MPHASIOC01_005261 (rho)
03019 Messenger RNA biogenesis [BR:
mphg03019
]
MPHASIOC01_005261 (rho)
Transcription machinery [BR:
mphg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MPHASIOC01_005261 (rho)
Messenger RNA biogenesis [BR:
mphg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MPHASIOC01_005261 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XCE74997
LinkDB
All DBs
Position
complement(5507337..5508596)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaaccttgcccgtatgcgcaaacaggacatcatcttcgctattctcaag
caacatgcgaaaagtggggaagatatctttggtgacggtgtactggagatattgcaggat
ggtttcggtttcctccgttctgcagacagctcctacctcgccggtcctgatgacatctac
gtttctcccagccaaatccgccgtttcaacctccgtaccggggacactatctcaggtaag
attcgtccgccgaaagaaggtgaacgctatttcgcgctgctgaaagttaacgaagttaac
tacgacaagccagaaaacgcacgtagcaaaattctgtttgaaaaccttactccactgcac
gccaactcacgtttgcgtatggagcgcggtaacggttcaacagaagacctcaccgctcgt
gtgctggatctggcttccccgattggccgtggccagcgtggtttgattgtggctccgcca
aaagcagggaaaacaatgctgctgcagaatattgctcagagcattgcttataaccaccct
gattgcgtgctgatggttctgctgattgacgaacgtccggaagaagtaaccgaaatgcag
cgtctggtaaaaggcgaagtggtcgcgtctacgtttgacgaaccagcctcccgccacgtt
caggttgctgaaatggtgattgagaaagcaaaacgcctggttgaacataaaaaagacgtt
atcattcttctcgattccattacccgtctggcgcgtgcttataacaccgtggtaccggct
tcaggtaaagtcctgactggtggtgtggatgcgaatgcattgcatcgcccgaaacgtttc
ttcggtgctgcgcgtaacgttgaagaaggcggcagcctgacaattatcgcaactgcgctg
attgataccgggtccaaaatggacgaggttatctacgaagaatttaaaggcaccggtaac
atggaactgcacttgtcccgtaagattgcggaaaaacgcgtcttcccggcaatcgactac
aaccgttccggtacccgtaaagaagagctgttgaccacttctgaagaactgcagaaaatg
tggatcctgcgtaaaattatccacccgatgggtgaaattgacgcaatggagttcctgatt
aacaagctggcgatgacgaagaccaatgacgagttcttcgacatgatgaagcgctcataa
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