Mycoplasmopsis phocirhinis: EG856_02320
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Entry
EG856_02320 CDS
T06916
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mphi
Mycoplasmopsis phocirhinis
Pathway
mphi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EG856_02320 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphi03400
]
EG856_02320 (uvrB)
DNA repair and recombination proteins [BR:
mphi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EG856_02320 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EG856_02320 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QBF34741
UniProt:
A0A4P6MSB3
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All DBs
Position
596878..598857
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AA seq
659 aa
AA seq
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MSKYNLVSKYQPAGDQPQAIAQLVQNINLGKKFQVLKGVTGSGKTFTIANVIANFDRPVL
VLSHNKTLASQLYSELKSFFPHNNVEYFVSYFDYYRPEAYIPSTDSYIEKNSQTNREIEA
MRMSTFNSLLTENNTIVVASVSAIYGALNPNEYSEQIFYIQIGDIYKRSDFFKKLIQKNY
KRNEIDQDLGTFSAKGDTVFIRPAHSEEFMIRVDFWDDTIEKIVTVNPLTKSIIQTHKQF
RIFPGDAYTVGNELIKKVVEQINEELQKQIHFFSLNNKLLEAQRIDERTTKDIDSLREFG
VCSGIENYSRFFDRREPGERPYTLLDYFANKNPLLIIDESHMMIPQLRGMYHGDRARKLN
LVEYGFRLPSALDNRPLRFDEFEAAFDFQTIFISATPEEYELNKTNGDLTRLFVRPTGLL
DPIIEVKSSKNQVEDIYDELQKQKQKNERTLILTTTKRLAEELTRYFLEKNEKIAFIHSE
HNTFERNRILLKLRKGIYDTVIGINLLREGIDLPEVSLIMVLDADKEGFLRDTKSLIQIA
GRAARNANGRVIFYADSISRSMKATIEDNQQKRNLQIAYNLKHNITPQTIIKEIPNALLD
DAKDDEISFYLTKNKINKKAKTQLLEELKAKMNEAAKNLDYEKAIEIRDLIIELESKNN
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatataatttggtttcaaaatatcaaccagccggtgaccaacctcaagcaatc
gcgcaattagtgcaaaatattaatttaggtaaaaaatttcaagttttaaaaggtgtaacc
ggaagtggtaaaacttttaccatagccaatgtgatagctaattttgatcgacccgtttta
gtattatctcataataaaaccttagcttcgcaattatatagcgaattaaaatcatttttt
ccacacaataatgttgagtattttgtctcctattttgattattatcggcccgaagcttat
attccttcaactgattcatatattgaaaaaaattcacaaactaatcgtgaaatagaagca
atgcgaatgtcaacatttaactcattattgactgaaaataatacaattgtagttgcttca
gtttcggctatatatggtgctttaaatcctaatgaatatagtgagcaaattttttacatt
caaattggtgatatttataaacgaagcgattttttcaaaaaacttattcaaaaaaattat
aaacgcaacgaaattgatcaagatttaggaactttcagcgccaaaggagacactgttttt
attcggccagcccacagcgaagaatttatgattagagtagatttttgagatgacactatt
gaaaaaattgtaacagttaatccactaactaaatcaattattcaaactcataaacaattt
cggatttttcctggtgatgcgtatacagttggtaatgaattaattaaaaaagttgttgag
caaataaatgaagaattacaaaaacaaattcattttttttcactcaataataaattatta
gaagcccaaagaatcgatgaacgaacaactaaagatattgattcactgcgtgaatttggt
gtgtgttccggtattgaaaactactcacgtttttttgatcgccgtgagcctggtgaaaga
ccttacactttattagattatttcgctaataaaaatcctttattaattattgatgaaagt
catatgatgattccacaattgcgtggaatgtatcatggcgatcgtgcccgtaagttaaat
ttagttgaatatggttttagattgccttcggctttagataatcgacctttgcgctttgat
gaatttgaagctgcgtttgattttcaaacaatttttatttcagctacacccgaagaatat
gaattaaataaaaccaacggagatttaacacgattatttgtgcgtcctaccggtctttta
gacccaattattgaagttaaaagttctaaaaaccaagttgaagatatttatgatgaattg
caaaaacaaaaacaaaaaaacgaacgcacattgattttaaccactactaaacgtctagca
gaagaattaactcgttattttttagaaaaaaacgaaaaaattgcttttattcattctgaa
cataatacttttgagcgcaatcgcattctattaaagttgcgtaaaggtatttatgatact
gttattgggattaatttattgcgtgaaggaattgacttgccggaggttagtttaattatg
gttttagacgctgataaagaaggttttttgcgtgacactaaatctttaattcaaattgcc
ggtcgagctgcccgtaatgctaatggtcgagtgatattttatgctgatagcatttcacga
agtatgaaagcaactattgaagataatcagcaaaaacgaaatttacaaatagcatataac
ttaaaacataatattacacctcaaacgattatcaaagaaataccaaatgctcttttagat
gatgctaaagacgatgaaattagcttttatttaactaaaaataaaattaataaaaaagct
aaaacacaattgctggaagaattaaaagctaaaatgaatgaagcggcaaaaaatttagat
tatgaaaaagcaattgaaattcgtgatcttattattgaattggaatcaaaaaacaattaa
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