Mycolicibacterium phlei: MPHLCCUG_00413
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Entry
MPHLCCUG_00413 CDS
T04305
Symbol
srmB_1
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
mphl
Mycolicibacterium phlei
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
MPHLCCUG_00413 (srmB_1)
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GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
OCC1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AMO59253
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Position
complement(402817..405144)
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AA seq
775 aa
AA seq
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MADFGRELLACAVEGTGRGGPDPLRHVADLPPRPGRPGSWPRWADPDVVRAFLDRGIEAP
WSHQLEAAELAHSGRHVVVSTGTASGKSLAYQLPILTALKSDSRARVLYLSPTKALGHDQ
LRNAVALTEAVPLPDVAPCAYDGDSPTDVRRFARERSRWIFSNPDMIHLSLLRNHARWAV
FLRNLRYVVVDECHYYRGIFGSNVAMVLRRLLRLCARYSPTAGMPTVIFASATTASPAET
ASELIGQTVVEVTEDGSPQGARTVALWEPPLLDELVGENGAPVRRSAGAEAAGVMADLVA
EGARMLTFVRSRRGAELTALAARARLEEIAPELANKVASYRAGYLAEDRRELERALVDGE
LRGLATTNALELGVDIAGLDAVVLAGFPGTVTSFWQQAGRCGRRGQSALIVLIARDDPLD
TYLVHHPAALLDGPIERVVIDPTNPYVLGPQLLCAAAELPLTDAEVRMWNAEAVADELVD
DGLLRRRPAGYFPSPGLDPHPAVDIRGASGGQIAILEAGTGRMLGSTGAGQAPSSVHPGA
VYLHQGETYLVDSLDFEDGVAFVHEADPGYTTSARELTDIAVTGEGERRTFGPVTVGLVP
VSVTNTVIGYLRRQLSGEVIDFVELDMPTRTLDTMAVMCTITPEALEHNGIDLLHLPGAL
HAAEHAAIGLLPLVASCDRGDIGGVSTAVGPVDGLPTIFVYDGYPGGAGIADRGYRKLDT
WWSATADAIEACECPAGCPSCVQSPKCGNGNDPLDKAGAVRVLRLVLKEIAGQGF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcggccgcgaactgctcgcgtgcgcggtcgagggcaccgggcggggcgga
cccgatccgctgcgtcacgtagcggacctgccgccgcgccccggccggcccggtagctgg
ccgcggtgggccgatccagatgtggtgcgggcgttccttgatcggggcatcgaggcaccc
tggtcgcatcagctggaggcggccgagctggcgcacagcggcaggcacgtggtggtcagc
accggcaccgcctcgggcaagtcgctggcctaccagttaccgatattgacggcattgaag
tccgattcgcgggcccgcgtgctgtacctgtcgccgaccaaggcgctcgggcacgaccaa
ctgcggaatgcggtggcgctcaccgaggccgtgccgttgcccgacgtcgcgccgtgcgcc
tacgacggcgacagccccaccgatgtgcgccggttcgcccgggagcggtcgcggtggatc
ttctccaacccggacatgattcacctgtcgctgttgcgcaaccacgcccgctgggcggtg
ttcctgcgcaacctgcgctacgtcgtcgtcgacgaatgccactactaccgagggattttc
ggctccaacgtggcgatggtgctgcgcaggctgctgcggctgtgcgcgcggtactcgccg
acggcgggcatgccgacggtgatcttcgccagcgcgacgacggcgtcgcctgccgagacc
gcctcggagctgatcggccagacggtggtcgaggtgaccgaggacgggtccccgcagggc
gcccgcacggtggcgctgtgggagccgccgctgctcgacgaactggtcggcgagaacggc
gccccggtgcggcggtcggcgggtgccgaggccgccggggtgatggccgatctggtcgcc
gagggcgcccggatgctgacgttcgtgcggtcgcgccgcggggcggagctgaccgcgctg
gccgcacgggcccggctggaggagatcgccccggagctggcgaacaaggtggcgtcctat
cgcgccgggtatctggccgaggaccgccgggagctggaacgcgccctggtcgacggggag
ctgcgcgggctggcgacgacgaacgcgctggagctgggcgtcgacatcgccgggctggac
gcggtggtgctggccgggttcccgggaacggtcacctcgttctggcagcaggccggccgc
tgcggccggcggggacagagcgcgctgatcgtgctgatcgcccgcgacgacccgctcgac
acctacctggtgcaccatccggccgcgctgctggacggcccgatcgagcgggtggtgatc
gacccgacgaacccgtatgtgcttggcccgcagctgctctgcgcggccgccgagctgccg
ctgaccgacgccgaggtgcggatgtggaacgccgaggcggtggccgacgagctcgtcgac
gacggcctgctgcggcgcaggcccgccgggtacttcccgagtccgggactggatccgcac
ccggccgtcgacatccggggcgcctcgggcgggcagatcgcgatcctggaggccggcacc
ggccgcatgctgggcagcaccggtgccggtcaggcaccgtcctcggtgcatccgggcgcg
gtgtacctgcaccagggcgagacctacctggtcgattcgctggatttcgaggacggcgtg
gcgttcgtgcacgaagccgacccgggatacaccacctcagcaagggagctgaccgatatc
gcggtcaccggcgagggggaacgcagaacgttcggaccggtgacggtgggcctggtcccg
gtgtcggtcaccaacaccgtcatcggatatctgcggcgtcagctcagcggcgaggtgatc
gacttcgtcgagctcgacatgccgacccgcacgctggacaccatggcggtgatgtgcaca
atcaccccagaggcgttggagcacaacggtatcgatttgctccacctgcccggcgcactg
cacgccgctgaacacgcggcgatcgggctgctgccactggtcgccagctgcgaccgtggc
gacatcggcggggtgtcgacggcggtgggcccggtggacggtctgccaacgattttcgtc
tacgacggctatcccggtggcgccgggatcgccgaccgcgggtaccgcaaactcgatacc
tggtggtcagcaacagcggacgcgatcgaggcgtgcgaatgcccggcgggctgcccgtcg
tgtgttcagtcgccgaagtgcggaaatggcaacgatccgctggacaaggcgggggccgtc
cgggttttgcggctggtgctcaaagagattgctgggcaggggttctga
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