Mycolicibacterium phlei: MPHLCCUG_00416
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Entry
MPHLCCUG_00416 CDS
T04305
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mphl
Mycolicibacterium phlei
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mphl03032
]
MPHLCCUG_00416 (topA)
03400 DNA repair and recombination proteins [BR:
mphl03400
]
MPHLCCUG_00416 (topA)
Enzymes [BR:
mphl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MPHLCCUG_00416 (topA)
DNA replication proteins [BR:
mphl03032
]
Prokaryotic type
DNA Topoisomerases
MPHLCCUG_00416 (topA)
DNA repair and recombination proteins [BR:
mphl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MPHLCCUG_00416 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Rep_1B
Motif
Other DBs
NCBI-ProteinID:
AMO59256
LinkDB
All DBs
Position
406491..409310
Genome browser
AA seq
939 aa
AA seq
DB search
MADEDGGSGRNGSVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDLPRNAADVPAKY
KSEPWARLGVDVDHNFEPLYIISPEKKSTVAELKDLLKNVDELYLATDGDREGEAIAWHL
LETLKPRIPVKRMVFHEITEPAIRAAAEHPRELDNALVDAQETRRILDRLYGYEVSPVLW
KKVAPKLSAGRVQSVATRIIVQRERERMAFRSAGYWDVTAELDASVSDPQAAPPTFTAKL
NTVDGRRVATGRDFDSLGQVKKPDEVLVLDEDAATALAAGLRGAQLTVTSVEQKPYTRKP
YAPFMTSTLQQEAGRKLRFSSERTMTIAQRLYENGYITYMRTDSTTLSESAINAARNQAR
QLYGEEYLHPTPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHGQLDADEFRLYELIWQR
TVASQMADARGTTLSLRISGQAADGRQVVFNASGRTITFPGFMKAYVESIDELAGGESDD
AERRLPNLTQGQRVDAKALTADGHTTSPPPRYTEASLIKALEDLGIGRPSTYSSIIKTIQ
DRGYVHKKGSALVPSWVAFAVIGLLEQHFSRLVDYDFTAAMEDDLDEIAAGNEQRTNWLK
KFYFGGEDGVGDSIARAGGLKKLVGVNLEGIDAREVNSIKLFDDDQGRPIYVRVGKNGPY
LERMVPDEDGEPGALKPQRANLKEDLTPDELTLELAEKLFATPQEGRVLGVDPATGHEIV
AKDGRYGPYVTEVLPEPEAGDDDGGAGSAAKKGKKPTGPKPRTASLLRSMDLETVTLDDA
LKLLSLPRVVGVDPNTGEEITAQNGRYGPYLKRGNDSRSLATEEQMFDITLEEALKIYAE
PKRRGGQRASAPPLRELGNDPATGKPMVIKDGRFGPYVTDGETNASLRKGDDVLTITDER
AAELLAERRAKGPVKRAKKTAAKKTAAKKAPAKKAAKKA
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgaggacggcgggagtggccgtaacggaagcgtgcggcggctcgtcatagtc
gagtcgccgaccaaggcgcgcaagatcgcgggctacctgggctcgaactacatcgtcgaa
tcgtcgcgcgggcacatccgtgacctgccgcgcaacgccgccgacgtgcccgcgaagtac
aagtccgagccgtgggcgcgcctgggtgtggacgtcgaccacaacttcgaaccgctctac
atcatcagcccggagaagaagagcacggtcgccgagctcaaggacctgctcaagaacgtc
gacgagctgtatctggccaccgacggtgaccgcgagggcgaggccatcgcctggcatctg
ctcgagaccctcaagccgcgcatcccggtcaagcggatggtgttccacgagatcaccgag
ccggccatccgcgcggccgccgagcatccgcgggaactggacaacgccctggtcgacgcg
caggagacgcgccgcatcctggaccggctgtacggctacgaggtcagcccggtgctgtgg
aagaaggtcgcgccgaagctgtcggcgggccgggtgcagtcggtggccacgcgcatcatc
gtgcagcgcgaacgcgagcgtatggcgttccgcagcgccggctactgggacgtcaccgcc
gagctcgacgccagcgtctccgacccgcaggccgcgccgcccacgttcaccgccaagctc
aacaccgtcgacggccgccgggtggccaccggccgtgacttcgactcgctgggccaggtc
aaaaagcccgacgaggtgctggtcctcgacgaggacgccgccaccgcgctggccgccggt
ctgcgcggcgcccagctgacggtcacctccgtcgagcagaagccgtacacccgcaagccg
tacgcgccgttcatgacgtcgacgctgcagcaggaggccggccgcaagctgcggttctcc
tcggagcgcacgatgaccatcgcgcagcggctctacgagaacggctacatcacctatatg
cgtaccgactccacgacgctgtcggagtcggcgatcaacgccgcgcgcaaccaggcccgc
cagctctacggcgaggagtacctgcacccgacgccgcgtcagtacacccgcaaggtgaag
aacgcgcaggaggcgcacgaggccatccggcccgccggtgacgtcttccagaccccgggc
cagctgcacggccagctcgacgccgacgagttccggctctacgagctgatctggcagcgc
accgtcgcctcgcagatggccgacgcccgcggcaccacgctgagcctgcggatctccggg
caggccgccgacggccgccaggtggtgttcaacgcctccggccgcaccatcacgttcccg
ggcttcatgaaggcctacgtcgagagcatcgacgagctggccggcggcgagtccgacgac
gccgagcggcggctgccgaacctgacccagggccagcgtgtcgacgccaaggcgctgacc
gccgacgggcacaccacctcgccgccgccgcgctacaccgaggcgtcgctgatcaaggcg
ctcgaggatctgggcatcggccggccgtcgacatactcgtcgatcatcaagaccatccag
gaccgcggctacgtccacaagaagggcagcgcgctggtgccgtcgtgggtggcgttcgcg
gtgatcgggctgctcgaacagcatttcagccggctggtggactacgacttcaccgcggcg
atggaggacgacctcgacgagatcgccgcaggcaacgagcagcgcaccaactggctcaag
aagttctacttcggcggtgaggacggcgtcggggactcgatcgcgcgggcgggcgggctc
aagaagctcgtcggcgtcaatctcgagggcatcgacgcgcgagaagtcaactccatcaag
ctcttcgacgacgatcagggccgtcccatctatgtgcgggtgggcaagaacggcccgtac
ctcgagcggatggtgcccgacgaggacggcgagccgggtgcgctcaaaccgcagcgcgcc
aacctcaaagaggacctgacgcccgacgagctcaccctcgagctggccgaaaagcttttc
gccacaccgcaagagggccgggtgctgggtgtcgacccggcgaccggacacgagatcgtg
gccaaggacggccggtacggcccgtacgtcaccgaggtgctgcccgaaccggaggccggc
gacgacgacggcggtgccggttcggcggcgaagaagggtaagaagccgacgggccccaag
ccgcgcacggcgtcgctgctgcggtcgatggacctggagacggtgacgctcgacgacgcg
ctcaagctgctctcgctgccccgggtggtgggcgtggatcccaacaccggtgaggagatc
accgcgcagaacggccgctacggcccgtacctcaagcgcggcaacgactcccggtcgctg
gccaccgaagagcagatgttcgacatcacgctcgaggaagcgctgaagatctacgccgag
ccgaaacgccgtggcgggcagcgtgcttcggccccgccgctgcgcgagctgggcaacgac
ccggcgaccggcaagccgatggtgatcaaggacggccggttcggcccctacgtcaccgac
ggcgagaccaacgccagcctgcgcaagggcgacgacgtgctgaccatcaccgacgagcgc
gccgccgagctgctggccgagcggcgtgccaaggggccggtcaagcgcgccaagaagacc
gccgcgaagaagaccgccgcgaagaaggccccggcgaagaaggccgcgaagaaggcctag
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