Mycolicibacterium phlei: MPHLCCUG_02840
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Entry
MPHLCCUG_02840 CDS
T04305
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mphl
Mycolicibacterium phlei
Pathway
mphl03030
DNA replication
mphl03430
Mismatch repair
mphl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPHLCCUG_02840 (dnaE)
03430 Mismatch repair
MPHLCCUG_02840 (dnaE)
03440 Homologous recombination
MPHLCCUG_02840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mphl03032
]
MPHLCCUG_02840 (dnaE)
03400 DNA repair and recombination proteins [BR:
mphl03400
]
MPHLCCUG_02840 (dnaE)
Enzymes [BR:
mphl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPHLCCUG_02840 (dnaE)
DNA replication proteins [BR:
mphl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPHLCCUG_02840 (dnaE)
DNA repair and recombination proteins [BR:
mphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPHLCCUG_02840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AMO61649
LinkDB
All DBs
Position
complement(2896481..2900026)
Genome browser
AA seq
1181 aa
AA seq
DB search
MSGSSSRSFVHLHNHTEYSMLDGAAKVKPLLAEAQRLEMPAIGMTDHGNMFGASEFYNAA
TDAGIKPIIGIEAYIAPGSRFDTKRIFWGDPSQKGDDVSGSGSYTHMTMVAENATGLRNL
FKLSSLASFEGQLGKWARMDAELIAEHAEGIIATTGCPSGEVQTRLRLGHDREALEAAAK
WREIFGPDNFFLELMDHGLDIERRVREGLLEIGRKLNIPPLATNDCHYVTRDAAQNHEAL
LCVQTGKTLSDPNRFKFDGDGYFLKPASEMRALWDDQVPGACDSTLLIAERVQSYADVWT
PRDRMPVFPVPEGHTPETWLRHEVHQGLTRRFPGADVPQDYLDRADYEIKVICDKGYPSY
FLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIQYGLLFERFLNPERVSMP
DIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDAARVHYGQPGFAIADR
ITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNA
GVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA
LENIKANRGINLDLDTVPLDDPKTYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDIV
AVLALYRPGPMGMNAHNDYADRKNGRQQIKPIHPELEEPLRDILDETYGLIVYQEQIMRI
AQKVAGYSLARADTLRKAMGKKKREVLEKEFEGFSEGMKANGFSDAAIKALWDTVLPFAD
YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLP
PDVNESSLNFASVGEDIRYGLGAVRNVGANVVESIIRTRTEKGKFVDFSDYLNKIDIAAC
NKKVTESLIKAGAFDSLGHPRKGLFLIHTDAVESVLGTKKAEAMGQFDLFGGADVATDSV
FTIKVPDEEWEDKHKLALEREMLGLYVSGHPLEGIAHLLAAQVDTPIPAILDGDVPNDTQ
VKVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSTFGADIADDAVVLVGAK
VAIRDDRVSLIANDLVVPDFSNAQTDRPIAVSLPTRQCTIDKVTALKQVLTRHPGTSQVH
LRLISGERITTLELDPSLRVTPSSALMGDLKELLGPGCLGG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcgtcgtcgcggtccttcgtgcacctgcataaccacaccgaatactcgatg
ctggacggcgccgcgaaggtcaagccgctgctcgccgaggcgcagcgcctggagatgccc
gcgatcgggatgaccgaccacggaaacatgttcggcgccagcgagttctacaacgccgcc
accgacgccggcatcaagccgatcatcggcatcgaggcctacatcgcgcccggttcgcgg
ttcgacaccaagcggatcttctggggtgaccccagccagaagggcgacgacgtctccggc
agcgggtcctacacccacatgacgatggtcgccgagaacgcgaccgggctgcgcaacctg
ttcaagctgtcgtcgctggcgtcgttcgagggccagctcggcaagtgggcgcgtatggac
gccgaactgatcgccgaacacgccgagggcatcatcgccaccaccggctgcccgtcgggg
gaggtgcagacccggctgcgcctcggccacgaccgggaggcgctcgaggccgccgccaag
tggcgcgagatcttcggcccggacaacttcttcctcgaactgatggaccacggcctcgac
atcgagcgccgggtccgcgaggggctgctggagatcggtcgcaagctcaacatcccgccg
ctggccaccaacgactgccactacgtcacccgtgacgccgcgcagaaccacgaggcgctg
ctgtgcgtgcagaccggcaagacgctgtcggacccgaaccggttcaagttcgacggtgac
ggctacttcctcaagcccgcctcggagatgcgcgcgctgtgggacgaccaggtgcccggg
gcgtgcgactcgacgctgctgatcgccgagcgggtgcagtcctacgccgacgtgtggaca
ccgcgcgaccggatgccggtgttcccggtgcccgagggccacaccccggagacctggctg
cgtcacgaggtacaccagggcctgacccgccgcttcccgggcgccgacgtgccgcaggac
tacctggaccgcgccgactacgagatcaaggtcatctgcgacaaggggtacccgtcgtac
ttcctgatcgtggccgacctgatcaactacgcccgctcggtcggcatccgggtgggcccg
ggccgtggttcggcggccgggtcgctggtggcctacgcgctgggcatcaccaacatcgac
ccgatccagtacgggctgctgttcgagcgcttcctcaacccggagcgcgtgtcgatgccc
gatatcgacatcgacttcgacgaccgcaggcgcggcgagatgctgcgctacgccgccaac
aagtggggcagcgaccgtgtcgcccaggtgatcacgttcggcacgatcaagaccaaggcc
gcgctcaaggacgccgcacgcgtgcactacggccagccgggcttcgcgatcgccgaccgg
atcaccaaggcgctgccgccgccgatcatggccaaggacatcccgctgtcgggtatcacc
gacccgaaccacgagcggtacaaggaggccgccgaggtccgcgggctgatcgacaccgac
ccggatgtgcgcacgatctacgagaccgcgcgcggtctggagggtctggtgcgcaacgcc
ggtgtgcacgcgtgcgcggtgatcatgagctccgaaccgctgatcgacgcgatcccgctg
tggaagcggccgcaggacggcgccatcatcaccggctgggactacccgtcgtgtgaggcc
atcggcctgctgaagatggacttcctgggcctgcgcaacctgacgatcatcggcgacgcg
ctggagaacatcaaagccaaccggggcatcaacctcgacctggacacggtgccgctcgac
gatcccaagacctacgagctgctgggccgcggcgacacgctgggcgtgttccagctcgac
ggcgggccgatgcgcgatctgctgcgccgcatgcagcccaccgggttcgaggacatcgtc
gcggtgctggcgctgtaccggcccggcccgatgggcatgaacgcccacaacgactacgcc
gaccgcaagaacggccgccagcagatcaagccgatccaccccgagctcgaggagccgctg
cgcgacatcctcgacgagacctacggcctgatcgtctaccaagagcagatcatgcgcatc
gcgcagaaggtggccggctactcgctcgcccgagcggacacgctgcgcaaggccatgggc
aagaagaagcgcgaggtcctggagaaggagttcgagggcttctccgagggcatgaaggcc
aacgggttctccgacgccgcgatcaaggcgctgtgggacaccgtgctgccgttcgccgac
tacgcgttcaacaagtcgcacgccgccggctacggcctggtctcgtactggaccgcctac
ctgaaggccaactacccggccgagtacatggcgggcctgctcaccagcgtcggcgacgac
aaggacaaggccgccgtctacctggccgactgccgccggctcggcatcacggtgctgccg
ccggacgtcaacgagtccagcctgaacttcgcctcggtcggtgaggacatccgctacggc
ctcggcgcggtccgcaacgtcggcgccaacgtggtggagtcgatcatcaggacacgcacc
gagaagggcaagttcgtcgacttctcggactacctcaacaagatcgacatcgcggcctgc
aacaagaaggtcaccgagtcgctgatcaaggccggcgcgttcgactcgctcggtcatccg
cgcaagggcctgttcctcatccacaccgacgccgtcgagtccgtgctcggcaccaagaag
gccgaggcgatggggcagttcgacctgttcggcggcgccgacgtcgcgacggactcggtg
ttcacgatcaaggtgcccgacgaggagtgggaggacaagcacaagctcgcgctggaacgc
gagatgctgggcctctacgtgtccgggcatccgctggagggcatcgcgcatctgctggcc
gcccaggttgacaccccgatcccggcgatcctcgacggcgacgtccccaacgacacccag
gtgaaggtcggcggcatcctcgcctcggtgaaccggcgggtgaacaagaacggattgccg
tgggcctcagcgcagttggaggacctcaccggcggtatcgaggtgctgttcttcccgcag
acgtactccaccttcggtgccgacatcgccgacgacgccgtggtgctggtcggcgccaag
gtcgcgatccgcgacgaccgggtctcgttgatcgccaatgaccttgtggtgccggacttc
tcgaacgcgcagacggaccggccgatcgcggtcagcctgccgacacggcagtgcaccatc
gacaaggtcaccgcgctcaagcaggtgctgacccgtcatccgggtacctcgcaggtgcat
ctgcggctgatcagcggggagcggatcaccacgctggagctcgacccgtcgctgcgggtg
acaccgtcgtcggcgctgatgggtgacctcaaggagttgctgggtccgggctgcctgggc
ggctga
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integrated database retrieval system
