Mycolicibacterium phlei: MPHLCCUG_03084
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Entry
MPHLCCUG_03084 CDS
T04305
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mphl
Mycolicibacterium phlei
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mphl03016
]
MPHLCCUG_03084 (rnd)
Enzymes [BR:
mphl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MPHLCCUG_03084 (rnd)
Transfer RNA biogenesis [BR:
mphl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MPHLCCUG_03084 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMO61889
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All DBs
Position
3137185..3138447
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AA seq
420 aa
AA seq
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MVDAEPADSDQAQTSEPEPTPLLAPRDGMPALSVSVDEIRRAAELLDSGHGPFAVDAERA
SGFRYSNRAYLMQIRREGAGTVLIDPVSHGGDPVRVLGPVAEVLRTDEWILHAADQDLPC
LAELGMRPTRLYDTELAGRLAGYEKVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEWLN
YAALDVEVLIDLRHAVAAVLEEQGKSAWAAEEFEHLRTFEPTPTRRDRWRRTSGIHKVRN
QRALAAVRELWITRDQIAQRRDIAPGRILPDSAIIQAATADPDTVERLTALPVFGGSRQR
RSAQVWLDALARARATKDPPTPQEPSNGPPPASRWARRKPEAAARLEAARAALAQVAQRV
SIPAENLVAPEAIRRLCWDWEAPADPADTAAVVDAVLREAKVRPWQRALTVDALADALRG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgcagaaccagccgactccgaccaggcgcagacctccgagccggagccgacc
ccgctgctggccccgcgcgacgggatgccggccctgtcggtcagcgtcgacgagatccgc
cgggcggccgagttgctcgactccgggcacggcccgttcgcggtcgacgccgagcgggcc
tcggggttccgctactccaaccgcgcctacctgatgcagatccgccgggagggtgcgggc
accgtgctgatcgacccggtcagccacggcggcgacccggtgcgggtgctgggcccggtt
gccgaggtgctgcgcaccgacgagtggatcctgcacgccgccgaccaggacctgccgtgc
ctggccgagctcgggatgcggccgacccgcctgtatgacaccgagttggcgggccggctg
gccggctacgagaaggtcaatctcgccgcgatggtgcagcggctgctgggtctgcagctg
atgaaggggcacggcgcggcggactggtcgaaacggccgctgcccgacgagtggctcaac
tacgccgcactcgacgtcgaggtgctcatcgacctgcgccacgcggtcgccgcggtgctc
gaggagcagggcaagagcgcgtgggccgccgaggagttcgagcatctgcgcaccttcgag
ccgacgccgacgcggcgggaccgctggcgccgcacctccggtatccacaaggtccgcaac
cagcgcgcgctggcggcggtgcgcgagctgtggatcacccgcgaccagatcgcacagcgc
cgcgacatcgcgccgggccggatcctgcccgactcggcgatcatccaggccgccaccgcc
gaccccgacaccgtcgagaggctgaccgcgctgccggtgttcggcggctcccgccagcgc
cgcagcgcgcaggtgtggctcgacgcgctggcccgggcccgcgccaccaaggacccgccc
acaccgcaggaaccgtccaacggtccaccgccggcgtcgcggtgggcgcggcgcaaaccc
gaggccgcggcccggctggaggctgctcgcgccgcgttggcccaagtggcgcaacgagtt
tcgataccggcagagaatctcgtcgcccctgaggcgatccgcaggctgtgctgggactgg
gaggcgcccgccgatccggccgacaccgccgccgtcgtcgacgcggtgctgcgcgaggcc
aaggtgcggccgtggcagcgcgcgctgaccgtcgacgcgctcgccgacgccctgcgcggc
tag
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