Mycolicibacterium phlei: MPHLCCUG_03108
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Entry
MPHLCCUG_03108 CDS
T04305
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mphl
Mycolicibacterium phlei
Pathway
mphl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MPHLCCUG_03108 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mphl03021
]
MPHLCCUG_03108 (sigA)
Transcription machinery [BR:
mphl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPHLCCUG_03108 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AMO61913
LinkDB
All DBs
Position
3159956..3161380
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AA seq
474 aa
AA seq
DB search
MYVAASEASPATDEPVKRTATKAPAKKAPAKKAAAKKAAKSAAPAKKAAKAPAKKATKAT
KATSSRAKKATAPAADTKGEAEDLESDDIDVEPVGDIDVEDTDLDLEDIDVAEDGETPAV
VEPAPADDDEEDDEIAEPSDKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQ
IGKVALLNAEEEVELAKRIEAGLYATQKLAEMTEKGEKIPTQLRRDMQWICRDGDRAKNH
LLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQA
ITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQ
QYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGV
VRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtggcagcgtcagaggcaagcccggcaaccgatgagccggtgaagcgcaccgct
accaaggcccccgccaagaaggcgcccgcgaagaaggccgcagcgaagaaggccgcgaag
tccgccgcgccggccaagaaggcggccaaggcgccggccaagaaggcgacgaaagccacc
aaggccacctccagccgcgcgaagaaggccaccgcgcccgcggccgacaccaagggcgag
gctgaggatctcgagagcgacgatatcgacgtcgagccggtaggcgacatcgacgtcgag
gacaccgacctcgacctggaggacatcgacgtcgccgaggacggcgagacccccgcggtc
gtcgagccggcccccgccgacgacgacgaggaagacgacgagatcgccgagccctcggac
aaggacaaggcgtcgggcgacttcgtctgggacgaggaggagtccgaggcgctgcggcag
gcccgcaaggacgccgagctcaccgcctccgccgactcggtgcgcgcctacctcaagcag
atcggcaaggtcgcgctgctcaacgccgaggaggaggtcgagctcgccaagcgcatcgag
gccggcctgtacgcgacgcagaagctcgccgagatgaccgagaagggcgagaagatcccg
acgcagttgcgccgcgacatgcagtggatctgccgcgacggcgaccgcgcgaaaaaccat
ctgctcgaggcgaacctgcgtctggtggtgtcgctggccaagcgctacaccggccgcggc
atggcgttcctggacctgatccaggagggcaacctgggtctgatccgcgcggtcgagaag
ttcgactacaccaagggttacaagttctccacctacgccacgtggtggatccgccaggcc
atcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatggtcgag
gtgatcaacaagctgggtcgcatccagcgcgagctgctgcaggacctgggccgcgagccc
acgcccgaggagctggccaaggagatggacatcacgccggagaaggtgctggagatccag
cagtacgcgcgtgagccgatctcgctggaccagaccatcggcgacgagggtgacagccag
ctcggtgacttcatcgaggactccgaggccgtggtggccgtcgacgcggtgtccttcacc
ctgctgcaggatcagctgcagtcggtgctcgagacgctgtccgagcgcgaggccggcgtc
gtgcggctgcgcttcggcctgaccgacggccagccccgcacgctcgatgagatcggccag
gtctacggcgtgacgcgtgagcggatccgccagatcgagtcgaagaccatgagcaagctg
cgccacccgagccgttctcaggtgctgcgggactatctggactaa
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