Mycolicibacterium phlei: MPHLCCUG_03930
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Entry
MPHLCCUG_03930 CDS
T04305
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
mphl
Mycolicibacterium phlei
Pathway
mphl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPHLCCUG_03930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mphl03021
]
MPHLCCUG_03930
03019 Messenger RNA biogenesis [BR:
mphl03019
]
MPHLCCUG_03930
Transcription machinery [BR:
mphl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MPHLCCUG_03930
Messenger RNA biogenesis [BR:
mphl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MPHLCCUG_03930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
S1CSD-TOTE-2
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
AMO62719
LinkDB
All DBs
Position
complement(4008714..4010636)
Genome browser
AA seq
640 aa
AA seq
DB search
MTDTDLITAGGGSDNNSLSDTVSPKISTAAADDATSASAARSTALSTMVLPELRALAKEI
GIEGASGMRKSELVAAIRERRGDTNGRGKKTASAENSADSAAEAGQAPADAGEAPAASQP
RRRERRGASRGTGSPEGTEGGQIALDAVAAEAPAEVKSEPAPEVQSAQDKAPEAKAAQDK
AADAPAGGSEPKGEGAKQDKSDKSEGDQQNDQGGQNRGGDDDGEGRGGRRGRRFRDRRRR
ERGGSGGDGETEVREDDVLQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLR
RGDAVTGAVRVPREGDAGDKNPRQKFNPLVRLDTVNGKPVEEARKRPEFGKLTPLYPNKR
LRLETTPEKLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIANAITTNNPECHLMVV
LVDERPEEVTDMQRSVKGEVISSTFDRPPSDHTQVAELAIERAKRLVEQGKDVVVLLDSI
TRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTG
DTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVL
SGLDPHQAIDLLLSQLRKTKNNYEFLVQVSKTAPGSMDTD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctgatcacggctgggggcggcagcgataacaattcgctgtcggac
accgtgagtccaaagatttcaactgcggcagcagacgacgcgaccagcgcgtccgccgcc
cgttcgaccgccttgtccacgatggtgctgccggaactgcgcgccctggccaaggagatc
ggcatcgagggcgcctcgggcatgcgcaagagcgagctcgtcgccgccatccgcgaacgc
cgcggtgacaccaacggccgcggcaagaagaccgcgtccgccgagaactccgctgacagc
gccgccgaggccggtcaggctcccgccgacgccggtgaggctcccgcggcctcgcagccg
cgtcgccgcgagcgccgtggcgcatcgcgtggcaccggttcgcccgagggcaccgagggt
ggccagatcgcgctcgacgccgtggccgccgaggcacccgccgaggtcaagagcgagccg
gcccccgaggtgcagtccgctcaggacaaggcccccgaggccaaggctgcccaggacaag
gccgccgacgcgcctgcgggtgggtccgagcccaagggtgagggcgccaagcaggacaag
tccgacaagtccgagggcgaccagcagaacgaccagggcggccagaaccgcggcggcgac
gacgacggcgagggccgtggcggccgtcgcggtcgccggttccgtgaccgccggcgccgt
gagcgcggcggcagcggcggcgacggcgagaccgaggtgcgcgaggacgacgtcctgcag
cccgtcgcgggcatcctcgacgtgctcgacaactacgcgttcgtgcgcacctccggctac
ctggccggcccgaacgacgtgtacgtgtcgatgaacatggtgcgcaagaacggcctgcgc
cgcggtgacgcggtgacgggtgcggtgcgcgtgccccgggaaggggacgcgggcgacaag
aatccgcggcagaagttcaacccgctggtccggctggacaccgttaacggcaagccggtc
gaggaggcgcgcaagcggcctgagttcggcaagctcaccccgctgtacccgaacaagcgg
ctgcggctggagaccacgccggagaagctgaccacccgtgtgatcgacctgatcatgccg
atcggcaagggccagcgcgcgctgatcgtgtcgccgccgaaggccggtaagaccacgatc
ctgcaggacatcgccaacgcgatcaccaccaacaacccggaatgccacctgatggtggtg
ctcgtcgacgagcgtccggaagaggtcaccgacatgcagcgctcggtgaagggcgaggtc
atctcctcgaccttcgaccggccgccgtcagaccacacccaggtcgccgagctggcgatc
gagcgggccaagcggctggtggagcagggcaaggacgtcgtcgtgctgctcgactcgatc
acccgcctgggccgcgcgtacaacaacgcgtccccggcgtcgggccgtatcctgtccggt
ggtgtggactccaccgcgctgtacccgccgaagcggttcctcggcgcggcccgcaacatc
gaggagggcggctcgctgacgatcatcgccaccgcgatggtcgagaccggttcgaccggc
gacaccgtgatcttcgaggagttcaagggcaccggcaacgccgagctcaagctggaccgc
aagatcgccgagcgccgggtgttcccggccgtcgacgtcaacccgtccggcacccgcaag
gacgagctgctgctctcgccggacgagttcgcgatcgtgcacaagctgcgccgggtgctg
tccggcctggatccgcaccaggccatcgacctgctgctcagccagctgcgcaagaccaag
aacaactacgagttcctggtgcaggtctccaagaccgccccgggctcgatggacaccgac
taa
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