Mycolicibacterium phlei: MPHLCCUG_04009
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Entry
MPHLCCUG_04009 CDS
T04305
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mphl
Mycolicibacterium phlei
Pathway
mphl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPHLCCUG_04009 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mphl03019
]
MPHLCCUG_04009 (deaD)
03009 Ribosome biogenesis [BR:
mphl03009
]
MPHLCCUG_04009 (deaD)
Enzymes [BR:
mphl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MPHLCCUG_04009 (deaD)
Messenger RNA biogenesis [BR:
mphl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPHLCCUG_04009 (deaD)
Ribosome biogenesis [BR:
mphl03009
]
Prokaryotic type
rRNA helicases
MPHLCCUG_04009 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
HEM4
CMS1
P-loop_SecA
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
AMO62797
LinkDB
All DBs
Position
complement(4099865..4101544)
Genome browser
AA seq
559 aa
AA seq
DB search
MTSSTADLANADLTFNDLQIHPSVLRAIADVGYETPSAIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPLLSKIDPKRRDTQALVLAPTRELALQVAEAFGRYGAHLPEINVLPIYGGA
SYGPQLAGLKRGAQVVVGTPGRVIDHLEKGRLDLSHLDYLVLDEADEMLTMGFAEEVERI
LAETPEYKQVALFSATMPAAIKKITTKYLHDPVEVTVKSKTATAENISQRYIQVAGPRKM
DALTRVLEVEQGDAMIVFVRTKQATEEVAERLRARGFAAAAINGDIPQAQRERTIAALKD
GTIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGQALLFVTPRE
RHLLKSIEKATRSKLIEAELPSVEDVNAQRVAKFRDSISEALNAPGIDLFRKLVEDYERE
NDVPMADIAAALAAQTRDGEEFFMKEPPPDKRRERDRDERPRRERPERRTRDDLATYRIS
VGKRHKVGPGHIVGALANEGGLHRSDFGHITILPDFSLVELPAKLPRKTIKALENTRISG
VKINLQPDRAPAKNRRKQK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcttccacggccgatctggccaacgccgatctcaccttcaacgacctgcagata
catccgtcggtactgcgggccatcgctgacgtcggctacgagacgccgtcggccatccag
gcggccaccataccggcgatgctggccggctccgacgtggtggggctggcgcagaccggt
accggcaagacggcggcgttcgcgatcccgctgctgtccaagatcgacccgaagcgccgc
gacacccaggccctggtgctggcgcccacccgcgagcttgcgctgcaggtcgccgaggcc
ttcggccgctacggtgcgcacctgcccgagatcaacgtgctgcccatctacggcggcgcc
tcctacggtccgcagctggccggcctcaagcgcggcgcgcaggtcgtcgtcggcaccccg
ggccgggtgatcgaccacctcgagaagggccggctggacctgtcgcacctggactacctg
gtgctcgacgaggccgacgagatgctgaccatgggcttcgccgaggaggtcgaacgcatc
ctcgccgagaccccggagtacaagcaggtggcgttgttctccgcgaccatgcccgcggcg
atcaagaagatcaccaccaagtacctgcacgaccccgtcgaggtcacggtcaagtcgaaa
accgcgaccgcggagaacatttcgcagcgctacatccaggtcgccgggccacgcaagatg
gacgcgctgaccagggtgctcgaggttgagcagggcgacgcgatgatcgtgttcgtccgc
accaaacaggccaccgaggaggtcgccgagcggctcagggcccgcgggttcgcggcggcg
gccatcaacggcgatatcccgcaggcgcagcgcgagcgcaccatcgccgcgctcaaggac
ggcaccatcgacatcctcgtcgccaccgacgtggccgcccgcggcctggacgtcgagcgg
atctcgcacgtgctgaactacgacatcccgcacgacaccgagtcctacgtgcaccgcatc
gggcgcaccgggcgggcgggccggtcgggtcaggcgctgctgttcgtcaccccgcgcgag
cgccatctgctcaagtcgatcgagaaggccacccgctcgaagctgatcgaggccgagctg
cccagcgtcgaggacgtcaacgcccagcgggtcgcgaagttccgcgactcgatctccgag
gcgctcaacgccccgggcatcgacctgttccgcaagctggtcgaggactacgaacgcgag
aacgacgtgccgatggccgatatcgcggctgcgctggcggcgcagacccgcgacggcgag
gagttcttcatgaaggagccgccgccagataagcgtcgagagcgcgaccgcgacgagcgg
ccgcgccgggagcggccggaacgccggacccgagacgacctggcgacgtatcgcatctcg
gtgggtaaacggcacaaggtcggcccgggccacatcgtcggcgcgctggccaacgagggc
ggcctgcaccgcagcgacttcggccacatcacgatcctgccggacttctcgctggtcgag
ctgcccgccaagctgccccgcaagaccatcaaagcgcttgagaacacccgcatttcgggg
gtgaagatcaacctgcagccggaccgtgcaccggcgaagaaccggcgcaagcagaaatga
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