Mycolicibacterium phlei: MPHLCCUG_04612
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Entry
MPHLCCUG_04612 CDS
T04305
Symbol
xthA_2
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mphl
Mycolicibacterium phlei
Pathway
mphl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPHLCCUG_04612 (xthA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphl03400
]
MPHLCCUG_04612 (xthA_2)
Enzymes [BR:
mphl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MPHLCCUG_04612 (xthA_2)
DNA repair and recombination proteins [BR:
mphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MPHLCCUG_04612 (xthA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DsbD_N
Motif
Other DBs
NCBI-ProteinID:
AMO63398
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All DBs
Position
4690958..4691773
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AA seq
271 aa
AA seq
DB search
MRIATWNVNSIRARVDRVTDWLQRADIDVLAMQETKCNDEQFPSMPFLAAGYEVVHCGFN
QWNGVAIASRVGIDDVQVGFDGQPTWSDKPEAEGTAEARALGATCNGVRVWSLYVPNGRT
VDSPHYVYKLEWLAALRDSANKWLAEDPSAQIALVGDWNIAPTDEDVWDMEVFKDSTHVT
PPERAAFNAILEAQFTDVVRPFTPGPGVYTYWDYTQLRFPKNRGMRIDFILGSPAFAQRV
THAEIVRDERKSGKNRIGSPSDHAPVLVELG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgcgacgtggaacgtcaactcgatccgggcccgggtggaccgggtcaccgac
tggctgcagcgcgccgacatcgatgtgctggcgatgcaggagaccaagtgcaacgacgag
cagttcccgtcgatgccgttcctggccgccggttacgaggtggtgcactgcgggttcaac
cagtggaacggggtggcgatcgcgtcgcgggtcggcatcgacgacgtgcaggtcgggttc
gacggtcagcccacgtggagcgacaagccggaggcggagggcaccgcggaggccagggcg
ctgggggcgacgtgcaacggggtgcgggtgtggagcctgtacgtgcccaacggccgcacc
gtcgactcaccgcactacgtgtacaagctggaatggcttgcggcgctgcgcgacagcgcg
aacaaatggctcgccgaggacccgtcggcacagatcgcactggtcggcgactggaacatc
gcacccaccgacgaggacgtgtgggacatggaggtgttcaaggacagcacccatgtcaca
ccgccggaacgggccgcgttcaacgcgatcctcgaggcgcagttcaccgacgtggtgcgg
ccgttcacgcccggtcccggggtgtacacctactgggactacacgcagcttcggttcccg
aagaaccgcgggatgcgcatcgacttcatcctcggctcaccggctttcgcgcaacgggtg
acccacgccgagatcgtccgcgacgaacgcaagagcggcaagaaccggatcggctcgccc
agcgatcacgctccggtgctggtggagctgggctga
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