Mycoplasma phocoeninasale: HGG64_00035
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Entry
HGG64_00035 CDS
T08146
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mphn
Mycoplasma phocoeninasale
Brite
KEGG Orthology (KO) [BR:
mphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mphn03032
]
HGG64_00035 (topA)
03400 DNA repair and recombination proteins [BR:
mphn03400
]
HGG64_00035 (topA)
Enzymes [BR:
mphn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HGG64_00035 (topA)
DNA replication proteins [BR:
mphn03032
]
Prokaryotic type
DNA Topoisomerases
HGG64_00035 (topA)
DNA repair and recombination proteins [BR:
mphn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGG64_00035 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
O-FucT
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QJG66124
UniProt:
A0A858TZ99
LinkDB
All DBs
Position
5661..7499
Genome browser
AA seq
612 aa
AA seq
DB search
MNEKVMIVESPNKVNTIQKYVGNDIKVISSVGHILKLATKGVGNLGIDFENWEPNMVPDP
AKKNIISELKKVTKDAKEVFIATDPDREGEAIANNLVSTLKLENKYKRIKYNEITAEAIK
IALNNPLLIDSNLVNAQKARRMLDRIIGFKLSQLMKQKIKNAPTSPSAGRVQSIALKLVC
DREREIEEFIPILYSKINAIIDEDIEANFFYKKDLDFSNDNTWIEPKKAKEILSKLDENK
FLLVSDYKVSQRREAMITPFKQSVLYKEAKYSSSIVQISAQKLFEAGLISYPRTDSTRLS
ETFIQKAKEYIKDKFGSEYVAEEIKGFKGEQDAHEAIRPTNIKLTPTEATTQFGLSETDS
YIYKIIYEKTIMALMNPPKRKIYQYELKNGEYFFKMSYTEVIFNGYYAITGFENPKPLPK
YEIGDKLGVDEFIKLDKQTTPPPRYSEGSLIKTLDDIKVGRPSTFASTINLIKKRLFVEV
QNSALHPTSFGKIVLDKLINGFPKTINEEYTAEVEADLDMISEGKEDYKILMEDFWKKFN
NHLYDVSQTIEITVLPSEFLNEKCPLCGNNLIYRYTKIKRSKFIGCTNFPSCNYIRNIEK
PKRSTWKWGSKK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaagttatgattgttgagtcgcctaacaaagtgaacacaattcaaaagtat
gttggtaatgatataaaagtcatatcatcagtgggtcatattttaaaattggcaaccaaa
ggggttggaaatttaggaattgattttgaaaactgagaaccaaatatggttcctgatccc
gccaaaaaaaatattatttccgaattaaaaaaggttacaaaggatgcaaaagaagttttt
attgccactgaccctgaccgtgaaggtgaagcaattgcaaacaatctagtttctactttg
aaattagaaaacaaatacaaaagaataaaatataatgaaattactgccgaagcaatcaag
atagcactaaataatcccctactaattgatagtaatttagttaatgcccaaaaagcgaga
agaatgcttgatagaatcattggatttaaattatcgcagttaatgaaacaaaaaataaaa
aatgcgccaacatcgccatcagctggtagagtacaatcaattgctctaaaattagtatgc
gatcgcgaaagagaaattgaagaatttataccaattttatatagcaaaattaacgctatt
attgatgaagatattgaagctaattttttctataaaaaagatttagattttagtaatgat
aatacatgaattgaacctaaaaaagcgaaagaaattttatctaaattagatgaaaataaa
ttccttttggttagtgattataaagtttcgcaaagacgtgaagcaatgatcacacctttt
aaacaatcagttttgtataaggaggccaagtattcatcttcaattgttcaaataagtgcg
caaaagctatttgaagctgggttaatatcatacccgagaacagactcaacaagattgagt
gaaacatttattcaaaaagcgaaagaatatattaaagacaaattcggttctgaatatgtt
gccgaagaaattaaaggttttaaaggtgaacaggatgctcatgaggctattagaccaact
aatattaaattaactccaactgaagcaacaacccaatttggtcttagtgaaactgatagt
tacatttataaaataatctatgaaaaaaccattatggctttaatgaatccaccaaaaaga
aaaatttatcaatatgagttaaaaaatggtgaatacttctttaaaatgtcatacactgaa
gttattttcaatggatattatgcaattacaggatttgaaaatcctaaacctctgccaaaa
tatgaaattggtgataaactgggggttgatgaatttattaaattagataagcaaacgact
ccaccaccaagatacagcgaaggttcattgatcaaaacgttagatgatattaaagttgga
agaccatcaacatttgcatcaacgattaatctaattaaaaaacgactatttgttgaagta
caaaatagcgctcttcatccgacttcttttggaaaaattgttttagataagctaattaat
ggtttccctaaaacaatcaatgaagaatacactgctgaagttgaagctgatcttgatatg
atttcagaaggcaaagaggactataaaatcttaatggaagatttttgaaaaaaattcaat
aatcatctatatgatgttagtcaaactattgaaattaccgtattgccaagcgagttctta
aatgaaaaatgcccattatgtggcaataatctgatttaccgatacacaaaaattaagcgc
agcaaatttatcggttgcactaacttcccgtcatgcaactatataagaaacatcgaaaaa
ccaaaacgatcaacatgaaaatgaggttcaaaaaaataa
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