Mycoplasma phocoeninasale: HGG64_00115
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Entry
HGG64_00115 CDS
T08146
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mphn
Mycoplasma phocoeninasale
Pathway
mphn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mphn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HGG64_00115 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mphn03021
]
HGG64_00115 (rpoC)
03400 DNA repair and recombination proteins [BR:
mphn03400
]
HGG64_00115 (rpoC)
Enzymes [BR:
mphn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HGG64_00115 (rpoC)
Transcription machinery [BR:
mphn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HGG64_00115 (rpoC)
DNA repair and recombination proteins [BR:
mphn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HGG64_00115 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
L_lactis_RepB_C
Motif
Other DBs
NCBI-ProteinID:
QJG66140
UniProt:
A0A858U117
LinkDB
All DBs
Position
complement(25982..30445)
Genome browser
AA seq
1487 aa
AA seq
DB search
MRKTSKYDLLQEDRIAEISLALATPNDIESWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPMIDYRCPVCGFKYKRVNEGDFCTRTELCRQEHVEILPKIARRNHMGHIKLNSPVVHFW
YFKVDHSIIYKLLGLRSSRGQENVRREELENLIYYKNHIVLENGGLKSLPKNQIIEINEA
AIIYKDALEELLQRFSPGSEEYEDIKETLDSLIEKASSKIGQEYGIDFYELNEVIEHYSD
AKIGTGALAIEYLLKNLDLQKEKEFVTNEINKLNAEELANTERFATTAKQTREKFYKRLQ
VINAFIESKQDPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLQQW
QEKDAPTLVIQNELRMIQEAVDALIDNQRRSPNPVLSKDNRPFKSISDALTGKKGRFRQN
LLGKRVDYSGRSVIVVGPSLKMHQCGIPREMAAKLFEPWIISRLIEKEVATTIKNAKKII
EDQNPIIWPHVAEAIKGRLVLLNRAPTLHRLSIQAFEPVLVRGKAIRLHPLVCTPFNADF
DGDQMAVHVPISEQALLESRELMLANKNILGPKDGEPIINPSQDMILGLYYLTIEEQNAK
GEGRVFDNFDHMMRALEAKKISLHARIALPADKVKDYRLFNGSNNQQYIISSVGKFIFNN
IFPKTFPFIYDNNVTKTVSLEDYNRFFNTKYVVTAPTNIPEYINYELSIQEGFNKKNIAK
IIRYVFDKYVASITMADVASVIDKITVPNMNILKSYMELKSYKNEKIDKEHALLLEAFTH
EEIKRINTLNPNRSQYQEIDPNVPLTAEEKAKILDGVWFKYTNIVASILDNIKQLGFDYS
TKSGISISFSDILETDKKEQYIAEGDEYISKLKHYYNIGYITDDDRYSLAIKKWAEIKDS
IQFELQNIIKANSQNPVITMINSGARGNIANYVQLAGMRGLMANNTKTTKADAKNDRVVR
STVEVPVKSSFIEGLTAFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVRQE
SCGSDYGYTARNIIDTKTKQIIVSLKERIIGRFTNKPVYTSTGIMICDRNELITEKIAQR
IIDSNIEEVEIRSILGCNTRNGVCKMCFGKDLATNRIVNIGEAVGIIAAQSIGEPGTQLT
MRTFHTGGVAGVEDITGGFTRLIELIDAHEQPWGRTAEISSYEGIVTKIEKSENDDSSYV
ITIETKDRKNNKIPHKVPVTTTKKLRVKENDRVKIGQKLSEGPIVLKKLLNLTDTITVQN
YLLKEIQRIYRIQGIAISDKYIEIIIRQMMSKIIIVDSGDSKFFAGAIVDIFDYQEENAQ
LLTKNLKPAFGKVVIKGAKQMPLLSDSFLAAASYQETSKILVHAAISSRVDTLSGLKENI
IIGKKIPSGTALYPFESYSKYDIKPSIKYFKSQESEDGEDEDNINIDLEALAKEIQQEDY
NPSDEELVADEDQDSSSEDMLEDEEDQSIDEDSDAEDDNVDEDFDIQ
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaacatcaaaatatgacttactacaagaagatagaattgctgaaatttcatta
gcccttgctactcccaatgatattgaaagttgatcacatggtgaagtaactaaaccagaa
accattaactataaaagctataagcctgaacgtggtggtttatttgacgaaattattttt
ggtccaatgattgactatcgttgtccagtttgtggctttaaatacaaaagagtaaatgaa
ggtgatttttgtacaagaactgaactttgtcgtcaggaacatgttgaaattcttcctaaa
attgctcgtcgtaatcacatggggcatatcaaattgaatagtccagttgttcatttttga
tattttaaagttgaccactcaattatttataaattactaggtttaagatctagtcgcggt
caagaaaatgttcgccgtgaagagcttgaaaacttaatttactacaaaaaccacattgtt
ctagaaaacggtggtcttaaatcattgcctaaaaatcaaattattgaaattaatgaagcc
gcaattatttataaagatgctttagaagaattgctacaaagatttagtcctggtagtgaa
gagtatgaagatattaaagaaacccttgattcattaattgaaaaagctagttcaaaaatt
ggtcaagaatatgggattgatttttatgaattaaatgaagtaattgaacattacagcgac
gctaaaattggtactggtgctttagcaattgaatacctactaaaaaatcttgacttacaa
aaagaaaaagaatttgtaactaatgaaatcaataaattaaacgcagaggaacttgctaat
accgaaagatttgcgacaactgctaaacaaactcgtgaaaaattctataaacgtctacaa
gttattaatgctttcatcgaatcaaaacaagatccaactagtatgttaatttataactta
ccagttattccagcagatttgcgtcctttgattcaattagatggtggtcgtcattcaact
tcggatattaatgaactttatcgtcgagtaattattagaaataatcggctacaacaatga
caagaaaaggacgctcctactttagttatccaaaatgaattaagaatgattcaagaagca
gttgatgccttaatcgataaccagagaagaagtcctaacccagttctttcaaaagataac
cgtcctttcaaatcaattagtgatgctcttaccgggaaaaaaggtcgttttagacaaaat
ctactaggaaagagggttgactattcaggccgttcagttatcgtagttgggcctagtcta
aaaatgcatcaatgtggaattcctcgggaaatggcagctaaattattcgaaccatgaatt
atttctcgtttaattgaaaaagaagttgcaactaccattaaaaatgccaaaaaaattatt
gaagatcaaaatccaataatctgacctcatgttgctgaggcaattaaaggaagattggta
cttctaaacagagcgccaaccttgcaccgtctatcaattcaagcttttgagccagtttta
gttagaggaaaagcaattagattacatccactagtatgtaccccatttaacgctgacttc
gatggtgaccaaatggcagttcatgtgccaatttctgaacaagctttactagaaagtcgc
gaattgatgttagctaataaaaatattttaggtccaaaagatggagaaccaattattaac
ccatcacaagatatgatactaggattgtactatctaactattgaagagcaaaatgctaaa
ggtgaaggtcgtgtttttgataattttgatcacatgatgcgagctttggaagctaagaaa
atttcacttcatgctagaattgccttaccagctgataaagttaaggattatcgtttattt
aatggtagcaataatcaacaatatattatctcttcagttggaaaatttatctttaataat
atttttccaaaaacatttccatttatttatgataacaatgttactaagacagtttcacta
gaagattacaaccgtttcttcaacactaaatatgttgtgactgctcctactaacattcca
gagtacatcaactatgaattgtcaatccaagaaggatttaacaagaaaaatatcgccaaa
attattcgttatgttttcgacaaatatgttgcatcaatcacaatggctgacgttgcttct
gtaattgataaaattactgttccaaacatgaatattttgaaaagctacatggaacttaaa
tcatataaaaatgaaaaaattgataaagaacacgctttactactagaagcattcactcat
gaagaaattaagcgaattaatacactaaatccaaatagatcacaatatcaagaaattgat
ccaaacgtgccactaacagcagaagaaaaagcaaaaattttagatggcgtatgatttaaa
tacaccaacattgttgcctcaattcttgacaacattaaacaattaggatttgactattcg
acaaaatcaggaatttcaatttcattttcagatattcttgaaactgataaaaaagaacaa
tacattgccgaaggtgatgaatatatttcaaaattaaaacactactacaatattggatac
atcactgatgacgatcgttactcactagcaattaaaaagtgagccgaaattaaagattca
attcaatttgaactacaaaacattattaaagcgaactcacaaaaccctgttattaccatg
attaattctggggctcggggaaacattgcgaactacgttcaattagccggaatgcgtgga
ctaatggcaaataacaccaaaaccactaaagccgatgctaaaaacgatagagttgttcgt
tcaactgttgaggttccagttaaatcatcatttattgaaggactaactgcttttgagttc
tactcttcaactcacggggctagaaaaggactaactgatactgctcttaacactgcaaaa
tcaggttacctaacaagaagactagttgatgttgctcaaaacattgttgttcgtcaagaa
agctgtggatcagattatggttatacagcgcgcaacattattgataccaaaaccaagcaa
attattgtttctctaaaagaaagaattattggtcgtttcactaataagccagtttataca
agcacaggaattatgatctgtgaccgaaatgaattaattactgaaaaaattgctcaaaga
attattgattcaaacattgaagaagtggaaataagatcaattcttggttgcaacactcgt
aatggagtttgcaagatgtgttttggtaaggatttagcaacaaacagaattgttaatatt
ggtgaggctgttggtattattgctgcccaatcaattggagagcccggaactcagctaact
atgcgtaccttccatactggtggggttgctggtgttgaagatattactggtggttttacc
cgtttaattgagttaattgatgcccacgaacaaccatgaggaagaaccgctgaaatttca
agctatgaaggaattgttaccaaaattgaaaaaagtgaaaatgatgattcaagttacgta
attaccattgaaaccaaagatcgcaaaaataacaaaattccacataaggttccagttact
acaactaaaaaactgagagttaaagaaaacgatagagttaaaattggtcaaaaattatca
gaaggtccaattgttcttaagaaattgttaaacttaactgatacaatcactgttcaaaac
tacttgctaaaagaaatccaaagaatttaccgtattcaagggattgcaattagtgataaa
tacattgaaattattattcgtcaaatgatgtctaagataatcatcgttgactctggagac
tcaaaattctttgctggtgcgattgttgatatttttgactatcaagaagaaaatgcccaa
ttattaactaagaacttaaaaccagcctttggtaaagttgtaattaaaggtgctaaacaa
atgcctctactatcagactcatttttagcagcggcttcatatcaagaaacatcaaaaatt
ttagtacatgccgctatttcatcaagagttgataccttaagtggactaaaagaaaatatt
attatcgggaaaaagattccttcaggaacagctttatatccttttgaatcatattctaaa
tatgatattaaaccttcaattaaatacttcaaatcacaagaatctgaagatggtgaagat
gaagacaacataaatattgacttagaagcattagctaaagaaattcaacaggaagattac
aacccatctgatgaagaattagttgctgacgaagatcaagacagcagcagtgaagatatg
ctagaggatgaagaagatcaatcaattgatgaagattctgatgccgaagatgataatgtt
gatgaagactttgacattcaataa
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integrated database retrieval system
