Mycolicibacterium phocaicum: MPHO_04970
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Entry
MPHO_04970 CDS
T07283
Name
(GenBank) putative RNA binding protein, contains S1 domain
KO
K06959
protein Tex
Organism
mphu
Mycolicibacterium phocaicum
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
MPHO_04970
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
HHH
HHH_6
Spt6_S1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
BBZ53505
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Position
513505..515943
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AA seq
812 aa
AA seq
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MNLSVKSVVKSVNARLAEELAVAEGQVDAAVRLLDEGATVPFIARYRKEVTGSLDDGQLR
TLEERLRYLRELDQRRDAVLASIEEQGKLTDDLKAALLAAETKSRVEDIYLPYKPKRRTK
AQIAREAGLEPLADRLLADPTLNPDDVAAEFLGEEVADVAAALDGARHILVERVSEDAEL
VGAVREKFWSDGTLTTKPWSEEAAKSPAAQKFRDYFEYSEPLEDMPSHRVLAVLRGEKEE
ALSLNFDGGDETLYQAMIAQSLGVDMSAGGAATPWLTATVGWAWRTKLMFSAAVDARIRL
RQRAEEDAVAVFAKNLKDLLLAAPAGTRATLGLDPGFRTGVKVAVVDGTGKVVDTCAIYP
HQPQNKWNDAKATLAALVARHNVELIAIGNGTASRETDALATELIADLKAAGASGPKRLP
TKAMVSEAGASVYSASAYAAHELPELDVTLRGAVSIARRLQDPLAELVKIEPKSIGVGQY
QHDVTPGTLARSLDAVVEDAVNAVGVDLNTASVPLLAKVSGVTESLAESIVSHRDKTGPF
RSRAGLLDVPRLGPKAFEQCAGFLRIREGDDPLDASGVHPEAYPVVRRILDRAGVTLAEL
IGDERKLRALKPGDFADERFGIPTVTDILGELEKPGRDPRPAFSTATFAAGVEKVSDLKV
GMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMADRFVSDPHEVVKSGQVVKVKVLEVDV
ERQRIGLSLRLNDDPQRARDGKRPEPGTAPRRDGGQPRGRDGGNRGGNGGGQNRGQNQDR
GRNPQRGNGGGRRESAPSGSMADALRKAGFGK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttgagcgtcaagtctgtcgtcaagtccgtgaacgcccgcctggccgaagagttg
gccgtcgccgaaggtcaggtcgacgccgcggtacggctgctggacgaaggcgcgaccgtg
ccgttcatcgcgcggtaccgcaaggaagtcaccggcagcctggacgacggccagctccgc
acgctggaggagcggctccggtacctgcgcgaactggatcagcgccgcgacgccgtgctc
gcgtcgatcgaagaacagggcaagctgaccgacgacctcaaggcggcgctgctggccgcc
gagacgaagtcgcgggtcgaagacatctacctgccgtacaagcccaagcgtcgcaccaag
gcccagatcgcccgtgaggccggtctggagcccctggcggaccggctgctcgccgacccg
acgctgaacccggatgacgtggccgcagagttcctgggtgaggaggtggccgacgtcgcc
gccgcactcgacggggcgcgccacatcctggtggagcgggtctcggaggacgccgaactg
gtgggcgcggtgcgcgagaagttctggtccgacggcaccctgaccaccaagccgtggtcg
gaggaagcggcgaaaagccctgctgcgcagaagttccgcgactacttcgagtactccgag
ccgctggaggacatgccgtcccaccgcgtgctggcggtgctgcgcggcgagaaggaagaa
gcactgtcgctgaacttcgacggtggcgacgagacgctgtaccaggccatgatcgcgcag
tcgctcggtgtggacatgagcgccggcggtgccgccacaccgtggctgaccgccacggtc
ggctgggcctggcgcaccaagctgatgttctcggccgccgtcgacgcccggatccggctg
cggcagcgcgccgaggaggacgccgtcgcggtgttcgccaagaacctcaaggatctgctg
cttgccgcacccgctgggacgcgcgccaccctcgggctcgaccccggtttccgcaccggc
gtgaaggtcgcggtggtggacggcaccggcaaggtcgtcgatacctgcgccatctacccg
catcagccccagaacaagtggaacgacgccaaggcaacactggccgccctcgtcgcgcgg
cacaacgtcgaactgatcgccatcggcaacggcactgcatcccgcgaaaccgacgcactg
gcaaccgaactcatcgctgacctcaaggccgcgggagcgtccggccccaagcggctgccg
accaaggccatggtcagcgaggcgggcgcctcggtgtactcggcgtcggcctacgccgcc
cacgagctgcccgagctcgacgtcacgctgcgcggcgcggtctcgatcgcccggcgcctg
caggacccgctcgccgaactggtcaagatcgagccgaagtccatcggtgtcgggcagtac
cagcacgacgtgacgcccggaactctggcccgcagcctcgacgcggtggtcgaggacgcc
gtgaacgccgtcggcgtcgacctcaacacggcctcggtgcccctactggccaaggtctcc
ggcgtgaccgaatcgctcgccgaatcgatcgtgtcgcaccgcgacaagaccggaccgttc
cgcagccgtgccggcctgctcgacgttccgcgcctgggccccaaggcctttgagcagtgc
gccggcttcctgcgcatccgcgaaggcgacgacccgctggacgcctcgggcgtgcatccc
gaggcctacccggtggtgcggcgaatcctcgaccgcgccggcgtcaccctcgccgaactg
atcggtgacgaacgcaagctgcgggcgctcaagccgggcgacttcgccgacgaacgattc
ggtatccccaccgtgaccgacatcctgggcgaactggagaagccgggccgcgacccgcgt
cccgcgttctccaccgcgaccttcgcggccggcgtcgagaaggtgtccgacctcaaggtc
ggcatggtgctggaaggcgtggtgacgaatgtggccgccttcggcgcgttcgtggacgtc
ggcgtgcaccaggacggtctggtgcacgtgtcggcgatggccgaccgcttcgtctccgac
ccgcacgaggtggtcaagtccggtcaggtcgtcaaggtcaaggtgctcgaggtcgacgtc
gagcggcagcgcatcgggctcagcctgcggttgaacgacgatccgcagcgcgcccgcgac
ggcaagcggcccgagccgggcaccgcgccccgccgcgacggcggtcaaccgcgcggacgc
gacggcggcaaccgcggtggcaacggtggcggccagaaccgcggccagaaccaggaccgt
ggccgtaatccgcagcgtggcaacggcggtggccgccgcgagtcggcgccgtcgggttcg
atggccgacgcgctgcgcaaggcgggtttcggtaagtag
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