KEGG   Mycolicibacterium phocaicum: MPHO_11900
Entry
MPHO_11900        CDS       T07283                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mphu  Mycolicibacterium phocaicum
Brite
KEGG Orthology (KO) [BR:mphu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mphu03016]
    MPHO_11900
Enzymes [BR:mphu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     MPHO_11900
Transfer RNA biogenesis [BR:mphu03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MPHO_11900
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: BBZ54198
LinkDB
Position
1206292..1207530
AA seq 412 aa
MTDADPVETSDDDPDVTPLLAPADGVPPVAIYASDIARAGELLASGHGAFAIDAERASGF
RYSNRAYLIQIRRAGAGTVLIDPVSHGIDPLKALAPVAEVVNSDEWILHAADQDLPCLAE
LGMTPPSLYDTELGGRLAGYDRVNLAAMVQRLLGLGLKKGHGAADWSKRPLPADWLNYAA
LDVEVLLELRAAVAAELESQGKTEWAAQEFEYMRTVEPTPTRRDRWRRTSGIHKVRNGQA
LAAVRELWQTRDVIAQRRDIAPGRILPDAAIISAAVANPDTIEKLTALPIFGGSRQKRSA
QVWLDALARAREADPPASEPNNGLPPPARWSRRKPEAFERLEACRSGLTLLSERVSVPTE
NLLTPETVRRLCWDWQPVADVAAAVDEFLTAAGARPWQRELCGPVLVAALSS
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgactgacgctgatccggtcgagacgtctgacgacgatcccgacgtcactcccctgcta
gcacccgccgacggcgtgccccccgttgccatctacgcgagcgacatcgcccgtgccggt
gagcttctggcatctggacacggtgccttcgcgatcgacgccgagcgggcgtcgggcttc
cgctactcgaaccgggcgtatctgatccagattcggcgcgcgggtgccggcacggtgttg
atcgaccccgtcagccatggcatcgacccgctgaaggcgctggcgccggtggccgaggtc
gtgaattccgacgagtggattctgcatgccgccgaccaggatctgccgtgccttgccgaa
ctgggtatgacgccgccgtcgctgtacgacaccgaactcggtggccggctggccggatac
gaccgggtgaacctggcggccatggtgcagcggctgctgggcctcggcctgaagaagggg
cacggcgcagccgactggtccaagcgtccgctgcccgcggactggctgaactacgccgcg
ctcgacgtcgaggtgctgctggaattgcgcgccgccgtcgccgccgagttggagtcccag
ggcaaaaccgaatgggccgcacaggaattcgagtacatgcggaccgtcgagcccaccccg
acgcggcgcgaccgctggcgtcggacgtcgggcatccacaaggtccgcaacggtcaggcg
ctggccgccgtgcgcgagctgtggcagacgcgcgacgtgatcgcgcagcggcgggacatc
gcgcccggccgcatcctgcccgacgcggcgatcatctcggcggccgtcgccaatccagac
accatcgaaaagctcacggcactaccgattttcggcggctcgcggcagaagcgcagtgcc
caggtgtggctcgacgcactggcccgcgcccgcgaagccgatccgccggcatccgagccg
aacaacggcctgccgccacccgcacggtggtcgcgccgtaagcccgaggcgttcgagcgg
ctggaggcctgccgcagcgggctgaccctgctgtccgagcgggtttcggtacccaccgag
aatctgctgacgcccgagactgttcggcgactgtgctgggactggcagccggtggccgat
gtcgccgccgcggtcgacgagttcctgaccgccgccggcgcccgcccgtggcagcgggag
ctgtgcgggccggtcctggtcgctgccctctcgtcctag

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