Entry |
|
Name |
|
KO |
|
Organism |
mphu Mycolicibacterium phocaicum
|
Brite |
KEGG Orthology (KO) [BR:mphu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:mphu03016]
MPHO_11900
Enzymes [BR:mphu01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MPHO_11900
Transfer RNA biogenesis [BR:mphu03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MPHO_11900
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1206292..1207530
|
AA seq |
412 aa
MTDADPVETSDDDPDVTPLLAPADGVPPVAIYASDIARAGELLASGHGAFAIDAERASGF
RYSNRAYLIQIRRAGAGTVLIDPVSHGIDPLKALAPVAEVVNSDEWILHAADQDLPCLAE
LGMTPPSLYDTELGGRLAGYDRVNLAAMVQRLLGLGLKKGHGAADWSKRPLPADWLNYAA
LDVEVLLELRAAVAAELESQGKTEWAAQEFEYMRTVEPTPTRRDRWRRTSGIHKVRNGQA
LAAVRELWQTRDVIAQRRDIAPGRILPDAAIISAAVANPDTIEKLTALPIFGGSRQKRSA
QVWLDALARAREADPPASEPNNGLPPPARWSRRKPEAFERLEACRSGLTLLSERVSVPTE
NLLTPETVRRLCWDWQPVADVAAAVDEFLTAAGARPWQRELCGPVLVAALSS |
NT seq |
1239 nt +upstreamnt +downstreamnt
atgactgacgctgatccggtcgagacgtctgacgacgatcccgacgtcactcccctgcta
gcacccgccgacggcgtgccccccgttgccatctacgcgagcgacatcgcccgtgccggt
gagcttctggcatctggacacggtgccttcgcgatcgacgccgagcgggcgtcgggcttc
cgctactcgaaccgggcgtatctgatccagattcggcgcgcgggtgccggcacggtgttg
atcgaccccgtcagccatggcatcgacccgctgaaggcgctggcgccggtggccgaggtc
gtgaattccgacgagtggattctgcatgccgccgaccaggatctgccgtgccttgccgaa
ctgggtatgacgccgccgtcgctgtacgacaccgaactcggtggccggctggccggatac
gaccgggtgaacctggcggccatggtgcagcggctgctgggcctcggcctgaagaagggg
cacggcgcagccgactggtccaagcgtccgctgcccgcggactggctgaactacgccgcg
ctcgacgtcgaggtgctgctggaattgcgcgccgccgtcgccgccgagttggagtcccag
ggcaaaaccgaatgggccgcacaggaattcgagtacatgcggaccgtcgagcccaccccg
acgcggcgcgaccgctggcgtcggacgtcgggcatccacaaggtccgcaacggtcaggcg
ctggccgccgtgcgcgagctgtggcagacgcgcgacgtgatcgcgcagcggcgggacatc
gcgcccggccgcatcctgcccgacgcggcgatcatctcggcggccgtcgccaatccagac
accatcgaaaagctcacggcactaccgattttcggcggctcgcggcagaagcgcagtgcc
caggtgtggctcgacgcactggcccgcgcccgcgaagccgatccgccggcatccgagccg
aacaacggcctgccgccacccgcacggtggtcgcgccgtaagcccgaggcgttcgagcgg
ctggaggcctgccgcagcgggctgaccctgctgtccgagcgggtttcggtacccaccgag
aatctgctgacgcccgagactgttcggcgactgtgctgggactggcagccggtggccgat
gtcgccgccgcggtcgacgagttcctgaccgccgccggcgcccgcccgtggcagcgggag
ctgtgcgggccggtcctggtcgctgccctctcgtcctag |