Mycolicibacterium phocaicum: MPHO_13010
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Entry
MPHO_13010 CDS
T07283
Symbol
topoM
Name
(GenBank) topoisomerase subunit TopoM
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mphu
Mycolicibacterium phocaicum
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mphu03032
]
MPHO_13010 (topoM)
03400 DNA repair and recombination proteins [BR:
mphu03400
]
MPHO_13010 (topoM)
Enzymes [BR:
mphu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MPHO_13010 (topoM)
DNA replication proteins [BR:
mphu03032
]
Prokaryotic type
DNA Topoisomerases
MPHO_13010 (topoM)
DNA repair and recombination proteins [BR:
mphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MPHO_13010 (topoM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF3281
Motif
Other DBs
NCBI-ProteinID:
BBZ54309
LinkDB
All DBs
Position
1319853..1321994
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AA seq
713 aa
AA seq
DB search
MTSTLDVPEQNQDLVLDQSADDYWNHYQLTFALYSVSDRAIPSAFDGLKPGQRRLLYQMH
DSKLLPGNKPQKSSKVCSAVTGNLHPHGGASMYGAAALMAAEFQRVKVIDGQGAFPRIQG
DIPAADRYTEMRLSAPGAALTAELDDHAVPMVPTFDGEWIEPTMLPAQWPVLLCNGAVGI
AEGWATKVPAHNPREIMAACRALLKTPNMTDDRLAKLIPGPDWGCGATVVGTAGLREYLT
TGRGALTVRGTLSVDGKNVVITELPPGVASNTVQDRIRALVESGELAGVADMSDLTDRRN
GLRIVVTAKRGHAAETIRDQLLALTPLESTFAASLVALDEDRVPRWWTVRELIGAFLHLR
DSVVLHRSQYRLEKVTARRHLVSGLMKIHLDIDTAVAIIRASDSVDDARRGLQAHFEIDE
EQANYVLALQLRRLTKLDVIELQAEADKLDAEFAELTELVSNPDARRVVIDNELKETAKL
FAGPEFDRRTVLDFEGTPTASSSDDDGPREKKVNANWRLDDRGVFSDSHGDLLSAGLGWA
VWTDGRIKFTNGNGLPFKTRDIPVAPDITGLLRSGVLTPGYHLALVTRRGKILRIDPAAV
NPQGAAGNGVAGVKLAGDGDEVIAALPITCGNGEAILSTSEKGWKVTEVADIPVKGRGGA
GVGFHPFVGGEDALLSAAVSPTGFVRNGKAVRAEKRAKSSVKGTGADVAPAEA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcgaccctggacgttcctgagcagaatcaggacctggtcctcgaccagagcgcc
gacgactactggaaccactaccagctgaccttcgcgctctacagcgtcagcgaccgcgcc
atcccgtcggcgttcgacggcctcaagccgggccagcgccggctgctgtaccagatgcac
gactcgaaactgctgcccggcaacaagccgcagaagtcttcgaaggtctgctcggccgtc
accggcaacctgcacccgcacggcggcgcgtcgatgtacggcgccgcggcactgatggcc
gccgagttccagcgcgtgaaagtcattgacggacaaggcgctttcccgcgcatccagggc
gacattccggccgccgaccggtacaccgagatgcggctgtccgcacccggtgcggcgctg
accgccgaactcgacgaccacgcggtgccgatggtgcccacgttcgacggggaatggatc
gagcccacgatgctgccggcccagtggccggtgctcctgtgcaacggcgcggtcggcatc
gccgaaggctgggccaccaaggtgcccgcgcacaatccgcgcgagatcatggcggcctgc
cgggcgctgctcaagaccccgaacatgaccgacgaccggctggccaaactcatccccggt
ccggactggggctgtggggcgacggtggtcggcaccgccgggctgcgcgagtacctcacc
accggccgcggtgcgctcaccgtgcgcggcaccttgtcggtcgacggcaagaacgtcgtg
atcaccgagctgccgcccggtgtcgcgagcaacactgtgcaggaccggattcgggcgctg
gtcgagtccggcgagctggccggtgtcgccgacatgtccgacctgaccgaccgccgtaac
gggctgcggatcgtcgtcaccgccaaacgcggccatgccgccgagaccatccgcgaccag
ctgctcgcgttgacgccgctcgagtcgacgttcgccgccagcctggtcgcgctcgatgag
gaccgcgtgccgcgctggtggacggtgcgcgagctgatcggcgcgttcctgcacctgcgc
gactccgtggtgctgcaccgcagccagtaccggctcgagaaggtcacggcgcgccgccat
ctggtgtcgggcctgatgaagatccacctcgacatcgacaccgccgtggcgatcatccgc
gcatccgacagcgtcgacgacgcccgccggggtctgcaggcacacttcgagatcgatgaa
gagcaggccaattacgtgctggcactgcaacttcggcggctgaccaagctcgacgtcatc
gaactgcaggccgaggcggacaagctcgacgccgaattcgcggaactcaccgagctggtg
tcgaatccggacgcccggcgcgtggtgatcgacaacgaactgaaggagacggcgaagctg
ttcgccgggcccgagttcgaccgccggacggtcctggacttcgagggcaccccaacggcg
tcgagctccgacgacgacggcccgcgggagaagaaggtcaacgccaactggcgccttgac
gatcggggcgtgttctccgacagccacggcgacctgctctcggctgggctgggatgggcg
gtgtggaccgacgggcgcatcaagttcaccaacggcaacggcctgccgttcaagacccgc
gacatcccggtggccccggatatcacggggctgctgcgctccggtgtgctgacgcccggc
taccacctggcactggtgacgcggcgcggcaagattctgcgcatcgacccggccgcggta
aatccacagggtgcggcgggtaatggcgtggcgggtgtgaagctggccggcgacggtgac
gaagtcattgccgcgctgccgatcacctgcggcaacggcgaagcaatcctgtcgacgtcc
gaaaagggttggaaggtaaccgaagtcgccgacatcccggtcaagggccgcggcggcgcc
ggcgtgggcttccacccgttcgtcggcggtgaggacgccctgctgtcggcggcggtctcc
ccgaccgggttcgtgcgcaacggcaaggccgtgcgcgccgagaagcgcgcgaaatcctca
gtgaagggcacgggcgccgacgtggcgccagcagaggcgtag
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