Mycolicibacterium phocaicum: MPHO_13340
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Entry
MPHO_13340 CDS
T07283
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mphu
Mycolicibacterium phocaicum
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mphu03016
]
MPHO_13340 (truB)
Enzymes [BR:
mphu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MPHO_13340 (truB)
Transfer RNA biogenesis [BR:
mphu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MPHO_13340 (truB)
Prokaryotic type
MPHO_13340 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
DUF6213
Motif
Other DBs
NCBI-ProteinID:
BBZ54342
LinkDB
All DBs
Position
complement(1350843..1351745)
Genome browser
AA seq
300 aa
AA seq
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MKAASKPAPPPGLVIVDKPAGMTSHDVVGRCRRLFGTRKVGHAGTLDPMATGVLVVGIER
ATKILGLLTATDKTYIATIRLGQTTSTEDAEGEVLQTVSAAHVTDGQIETAVAALRGEID
QVPSAVSAIKVDGERAYKLVREGKAPELAARRVRIERFTVDAVRRVEDFVDVDVTVDCSS
GTYIRALARDVGAALGVGGHLTALRRTKVGRYGLDEARTLEQLTDAAELSYSLDAACLLG
FPRRDLTDGETEDTRHGRALTPAGIDGTYAATAPDGRVIALLEDGPKRTSSVVVLRPATL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcggcgtcgaagccggctccgccgccggggctggtgatcgtcgacaagcccgcc
ggaatgacgagccacgacgtcgtcggcaggtgccggcgattgttcggcacccgcaaggtc
gggcacgccggcacgctcgaccccatggcgaccggcgtgctggtggtcggcatcgagcgt
gccaccaagatcctgggcctgctgaccgccaccgacaagacgtatatcgcgaccatccgg
ctcgggcagaccacgtcgaccgaggatgccgaaggggaagtgctgcagacggtttcggcc
gcgcacgtgaccgacgggcagatcgaaaccgcggtcgcggcattgcgcggtgagatagac
caggtgccgtcggccgtcagtgcgatcaaggtcgacggcgagcgggcctacaagttggtg
cgcgaaggcaaggcgcctgagttggcggcccgccgggtacggatcgaacgcttcacagtg
gacgcggtgcggcgggtcgaggatttcgtcgatgtcgatgtcacggtggactgctcgtcg
ggcacctacatccgggcgctggcccgtgacgtcggtgccgcgctcggcgtcggtgggcac
ctgacggcgttgcggcgcaccaaggttggccgctacgggctggacgaggcgcgcacgctg
gaacagctgaccgatgcggccgagttgagctactcgctggacgcggcgtgcctgctgggg
ttcccacggcgcgacctgaccgacggcgagaccgaggacacgcgccatggccgggctctc
acgccggcgggtatcgacgggacctacgctgcgaccgcgcccgacgggcgggtcatcgcg
ctgctggaggacgggcccaagcgcaccagcagcgtcgtggtgctgcggccggcgacgttg
tag
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integrated database retrieval system
