Mycolicibacterium phocaicum: MPHO_17530
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Entry
MPHO_17530 CDS
T07283
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mphu
Mycolicibacterium phocaicum
Pathway
mphu03030
DNA replication
mphu03430
Mismatch repair
mphu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPHO_17530
03430 Mismatch repair
MPHO_17530
03440 Homologous recombination
MPHO_17530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mphu03032
]
MPHO_17530
03400 DNA repair and recombination proteins [BR:
mphu03400
]
MPHO_17530
Enzymes [BR:
mphu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPHO_17530
DNA replication proteins [BR:
mphu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPHO_17530
DNA repair and recombination proteins [BR:
mphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPHO_17530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DUF6317
Motif
Other DBs
NCBI-ProteinID:
BBZ54761
LinkDB
All DBs
Position
1790496..1792202
Genome browser
AA seq
568 aa
AA seq
DB search
MRGGEIIGELATLIDPGRAIPPQIVQLTGITTAMVCDAPRIESVLPAFLEFCRGAVLVAH
NAGFDIGFLRAAAERAQLPWPNPPVLCTVKLARRVLTRDEAPSVRLSELARLFRATTTPT
HRALDDARATVDVLHGLLERIGNQGVHTLAELRGYLPDVTRAQRRNRKLADALPSSPGVY
LFRGPSEEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAIRVDHVECAHELEAGVRE
LRLLAAHAPPYNRRSKAPHKWWWVVLTDEAFPRFSVVRAPRHDRAVGPFRAHADAVDSAL
LLARFTGVRTCTTRLARAAQHGPQCPERELSPCPAPRGITAGAYAEFADRAAENIAGVDD
SALCTALKHIDDLASEGRFETAARLRDHAATVIDGLWRGQRLRALTALPELVAARPDGAG
GWHLVVVRYGQLAAAGNAPRRVPPMPVVDAISAAAQVILTAERPLGGAPVEEVALIVRWL
AAPGVRIVRTSADDESGYCLPVTAAGRWAEWAATARSARAAAQQAQRSDLLGEPSPPREQ
LLGRTRIDRLGGAGQATLPRRHPLGVAG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggcggcgagatcatcggcgaactggccaccctgatcgaccccggtcgcgccatc
ccgccacagatcgtgcagctgaccgggatcaccacggccatggtgtgcgacgccccccgc
atcgaatcggtgctgcccgcctttctggagttctgccgcggcgccgtcctggtcgcccac
aacgcgggcttcgacatcggcttcctgcgggcggcggccgagcgggcgcagctgccctgg
cccaaccctccggtgctgtgcacggtcaagctggcccgccgggtcctgacgcgcgacgag
gcaccgagcgtccggctctcggagctggcccggttgttccgcgccaccaccacccccacg
caccgcgccctcgacgacgcccgcgccaccgtcgacgtgctgcacggactactcgagcgc
atcggcaatcagggtgtgcacacgctggccgaactgcgcggctatctcccggacgtcacc
agggctcagcgccgcaaccgcaagctcgccgacgcgctgccgagctcccccggcgtctat
ctgttccgcgggccgtccgaggaggtgctgtacgtgggcaccgcggtcgatctgcgccgt
cgggtccggcagtacttcaccggcgccgacccgcgcgcccgcatgaaagagatggcgtca
ctggccatccgcgtcgaccatgtcgagtgcgcccacgagttggaggccggcgtgcgcgaa
ctgcggctcctcgccgcgcacgcgccgccgtacaaccggcgctcgaaggccccgcacaag
tggtggtgggtggtgctcaccgacgaggccttcccccgcttcagcgtggtgcgggcgccg
cgacacgatcgggcggtcgggccgttccgggcccatgccgacgccgtcgactccgcgctg
ctgctggcccgcttcacgggcgtgcggacctgtacgacgcggctggcgcgggccgcccaa
cacgggccgcagtgtccggagcgggaactgtcgccatgtccggcgccccgcggcatcacc
gcgggcgcctacgccgaattcgccgaccgggccgcggaaaacattgccggcgttgatgat
tccgcactgtgcacggcactgaaacacatcgacgacctggcttccgagggccgtttcgag
accgccgcgcggctccgcgaccatgccgcgaccgtcatcgacggactgtggcgcggccag
cgcctgcgcgccctgaccgcactgccggagctggtggccgcccggcccgacggcgccggc
ggctggcacctcgtcgtggtccggtacggccagctggcggcagccgggaacgcaccgcgg
cgagtcccgccgatgcccgtcgtcgacgcgatatccgctgcggcacaagtgatcctgaca
gcggagcggccgctgggcggcgcgcccgtcgaggaggtggcgctcatcgtgcgctggttg
gccgcgccgggtgtgcgcatcgtgcgcacctccgccgacgacgaatccgggtactgccta
ccggtcaccgcggccggccggtgggccgagtgggccgccaccgcccggtcggcccgggcg
gcggcgcagcaggcacagcgctcagaccttctgggtgaaccgagcccaccgcgcgagcag
ctgctcggccgcacccgaatcgatcgcctcggtggcgcgggccaggccacgctcccacgc
cggcacccactgggcgtcgctggatag
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