Mycolicibacterium phocaicum: MPHO_22300
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Entry
MPHO_22300 CDS
T07283
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mphu
Mycolicibacterium phocaicum
Pathway
mphu03420
Nucleotide excision repair
mphu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPHO_22300
03430 Mismatch repair
MPHO_22300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphu03400
]
MPHO_22300
Enzymes [BR:
mphu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPHO_22300
DNA repair and recombination proteins [BR:
mphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPHO_22300
MMR (mismatch excision repair)
Other MMR factors
MPHO_22300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
AAA_19
UvrD-helicase
UvrD_C_2
Viral_helicase1
DEAD
SLFN-g3_helicase
AAA_22
AAA_25
nSTAND3
AAA_30
AAA_5
AAA_11
NPHP3_N
ATPase
Motif
Other DBs
NCBI-ProteinID:
BBZ55238
LinkDB
All DBs
Position
2305221..2307179
Genome browser
AA seq
652 aa
AA seq
DB search
MTTDAKKALELADEQTAQKQYRKLLIEKAAEPVVYSGPANGRWTGTGIPTPRAVGAGDLL
GRVALVKPDQDLLDGASDFYIGETHAIINGVNVFGWTSPVAATFFRGTNQHYLCKEVAVV
RALISRSGHIIDFVDETVRPDAPESPFRKRGLKIPAPPTKPKLTATPASMPRIIETSSNS
SAPSLAHQPPPVSVSTDPADGLPPLRAESLLRQQLKAPRTRSLAPVLSTLQPDQYDLVTR
PAMDSIIIEGQPGTGKTIVASHRAAYLVNDETPPENTLDGTVLVVGPTSGYSRHVRAVIT
RLAGPTDRIKVLSLPEIINKLIGIKREPRSHQTRTWHDGDWHLARLTRSALARIKNADGL
TPTPEAVYEYLRTKTRSVTTDPEWSRYLQLLPPYKAALLNERHAPLIAFIKWEILGPREF
AGVEHIIVDEAQDVTPLEWYLLDEINEADTWTILGDLNQRRSDHTLTSWSSVLEVIAIEE
DTPIRRMERGYRSTRPILEFANRLLPRQHRKLVALQETGPNPTILKVPAKDLATQTVAEI
KRLTDTHSAGTVAVVCTSPSLITKALRGHHWNNDPLEEALWRHDSREVRVTTIDEARGLE
FDAVVVVEPADFPLNIGRHGPLYTALTRANRELSVVYSRSLPDALRSRQVAR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
gtgacgactgatgccaagaaagcgttggagctggcagacgagcaaacggcccaaaagcaa
taccggaaactcctaattgaaaaggcagccgagccggtagtttacagcgggccggccaac
gggcgatggacaggcacaggtatacccacaccgcgagcggtgggcgctggcgacttgctc
ggacgtgtggctctcgtgaaacccgaccaagatcttctcgacggcgcgtccgatttctac
atcggcgagacgcacgcaattatcaacggagtgaacgtattcgggtggaccagcccggtc
gctgctacattcttccggggtactaaccaacattacttatgcaaggaagtcgcagtcgtg
cgcgcgcttatctcgcgcagtggccatataattgattttgtcgacgagaccgtgcgacct
gacgcccccgaaagcccgtttcgcaagcgtggcctgaagattcccgcaccaccgacgaaa
ccaaagctgacagcaacaccagcatcgatgccacgaataatcgagaccagctcgaactcg
agcgctccttcgctggctcatcagccgccacccgtttcagtctcgacggaccctgctgac
ggccttccgccactgcgagctgaatcgctgctacggcagcagctaaaggcaccacgcaca
agaagcctggcaccggtcttgtctacgctccaacctgatcaatacgacctggtcacaagg
cctgcgatggacagcatcatcatcgagggccaacctggtaccggtaagactatcgtcgcg
tcacaccgagcggcatacctggtgaacgacgagaccccacccgaaaacacgctcgatggc
acggtcctcgtggttggtccgacgtctggttactcacggcacgtccgcgctgtcatcact
cgtcttgctggcccgactgaccggataaaggtgctgtcgttgcccgagataattaacaag
ttgatcggtatcaagcgcgagccgcgctcacaccaaacgcgaacttggcacgatggcgac
tggcatctggcccggctgacgcggtcggcacttgcaaggatcaagaacgccgatgggctc
acaccgacgcctgaagcagtctatgagtacctccggacgaaaactcgaagcgtcaccacc
gacccagagtggtctcgatacctacagctcctgccgccgtacaaggccgcactgctgaat
gagcgccatgctccgttgatcgcattcatcaaatgggagattctcggcccacgtgaattc
gccggtgtcgagcacatcattgtcgatgaggcgcaagacgtgacaccgttagagtggtat
ctcctggatgagatcaacgaggccgacacctggacgatcctcggcgatctgaatcagcgt
cggtctgaccacaccctcaccagctggtccagtgtcctggaagttattgccatcgaagag
gacacgccaatccggaggatggagcggggctaccgctccaccagaccgatcctcgagttc
gcaaaccgactgctgccacgccagcaccgaaagctggttgcattacaggaaactggacca
aatccgacgatcctcaaggtacctgccaaagacctcgcaacgcagactgtcgctgagatt
aagcgtctgactgacacgcattcggccggtaccgttgcggttgtctgcacgtctccgtca
ctcatcaccaaggctctccgcgggcaccattggaataatgatccactcgaagaagccctg
tggcggcacgacagccgcgaggtgcgcgtgaccaccatcgacgaggctcgcggcctcgaa
ttcgatgcagtggtggtcgttgagcccgcagacttccctctgaacatcggccgccacggt
ccgctctacacagcactcacacgggcgaatcgcgaactctcggtggtgtattcacgttca
ctgccggatgcccttcgcagcaggcaggtagcaaggtga
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