Mycolicibacterium phocaicum: MPHO_22950
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Entry
MPHO_22950 CDS
T07283
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mphu
Mycolicibacterium phocaicum
Pathway
mphu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPHO_22950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mphu03000
]
MPHO_22950
03400 DNA repair and recombination proteins [BR:
mphu03400
]
MPHO_22950
Enzymes [BR:
mphu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MPHO_22950
Transcription factors [BR:
mphu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MPHO_22950
DNA repair and recombination proteins [BR:
mphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MPHO_22950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
DUF6233
RecR_HhH
DUF6001
Motif
Other DBs
NCBI-ProteinID:
BBZ55303
LinkDB
All DBs
Position
2386956..2388476
Genome browser
AA seq
506 aa
AA seq
DB search
MYDDFDRCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQRA
GFRACKRCRPDASPGSPEWNIRTDVVARAMRLIADGTVDREGVTGLAARLGYTTRQLERL
LQAEVGANPLALARAQRSQTARVLIETTKLPFGDVAFAAGFSSIRQFNDTIREVCALTPT
ELRLRAQARFEPNENPGTGTLSVRLPVRTPFAYEGVFGHLAAGAVPGVEEVRDGTFRRTL
RLPNGTGIVGLSPSVDHVQCTLILDDFRDLATAIARCRRLLDLDADPEAVIDVLNTDQHL
APIVAKAPGQRIPRTVDENELALRVVIGQQVSMKAAATHTRRLALAYGTPINDPAGALTH
VFPSVTQLAEIDPSHLAFPESRRRTVVALIDALAAGTLELDAGSDWLQARTQLAELPGIG
PWTAEVIAMRGLGDPDAFPASDLGVRAAAKQAGLPANSRQLIEHSAHWRPWRAYATQHLW
TSLDHAVNQWPPLTINPSQSPQQEQA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgacttcgaccgctgctatcgggcagtccaatccaaggacgcccggttcgac
ggttggttcgtcacggccgtcctcaccaccggcatctactgccgccccagttgccctgtc
cggcctccgttcgcgcgcaacgtccgcttctacccaaccgccgcggcagcgcagcgggcc
ggcttccgggcctgcaagcgctgccggcccgacgcatcgccggggtcaccggaatggaac
atccgcaccgacgtcgtggcccgcgccatgcgcctgatcgccgacggcaccgtcgaccgc
gagggagtgacggggctggcggccaggctcggctacaccacccggcaactcgagcggctg
ctccaggccgaggtcggcgcgaaccccttggcgctggcccgagcccagcggagccagacc
gcgcgggtactcatcgagaccacgaaactgccattcggtgatgtcgcgttcgccgccgga
ttttccagcatccgccagttcaacgacaccattcgcgaagtgtgcgcactgacgccgacc
gaactccggctacgggcgcaggcgcgcttcgaacccaacgaaaacccgggcacgggaaca
ctttccgtccggctgccggtacgtacgcccttcgcctatgagggggtgttcggccacctg
gcggccggcgcggtgcccggcgtcgaagaggtacgcgacggcacgttccgacgcaccctg
cggctccccaacggcaccggcatcgtcgggctctcaccgagcgtggaccatgtgcagtgc
acgctgatcctcgatgacttccgcgacctggccaccgccatcgcccggtgccggcggctc
ctcgacctcgatgccgaccccgaggcggtcatcgacgtcctcaacaccgaccagcacctg
gcgcccatcgtcgccaaggcgcccgggcaacgcatcccccgcacggtggacgagaacgag
ctggcgctgcgggtggtgatcggccagcaggtgtccatgaaggccgccgcgacgcacacg
cgccggttggcgctggcgtacggcacgcccatcaacgacccggcgggagccttgacccat
gtcttcccgtccgtcacgcaactggccgagatcgatccgagccacctggctttccctgag
tctcgccgacgcacggtcgtcgcactgatcgacgccctcgccgccggcaccctcgagctc
gacgccgggtcggactggctgcaggccagaactcaactggccgaactgcctggcatcggg
ccatggaccgccgaggtgatcgcgatgcgcggcctcggcgaccccgatgcctttcccgcc
agcgacctcggcgtccgggcggccgccaaacaagctgggctgccagccaattcacggcaa
ttgatcgagcacagtgcacactggcgcccatggcgtgcctacgccacccaacacctgtgg
acctctctggatcatgcggtcaaccagtggccgcccctgaccatcaacccatcgcaatca
ccacaacaggagcaggcatga
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