Mycolicibacterium phocaicum: MPHO_44080
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Entry
MPHO_44080 CDS
T07283
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mphu
Mycolicibacterium phocaicum
Pathway
mphu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPHO_44080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mphu03019
]
MPHO_44080
03400 DNA repair and recombination proteins [BR:
mphu03400
]
MPHO_44080
Enzymes [BR:
mphu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPHO_44080
Messenger RNA biogenesis [BR:
mphu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPHO_44080
DNA repair and recombination proteins [BR:
mphu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MPHO_44080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
BBZ57416
LinkDB
All DBs
Position
4574571..4576670
Genome browser
AA seq
699 aa
AA seq
DB search
MPTQYPSPATPTRTDAQALLEQLAGPGAVLRDDQWVAIEALVVQGRRALVVQRTGWGKSA
VYFIAAKLLRAAGRGPTVIVSPLLALMRNQVAAAERAGVRAATINSSNVTEWDEVHQRVA
SGDLDVLLVSPERLNNPDFRDAVLPALAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLI
GELGAGIPVLATTATANDRVVQDVAAQLGVGGGDTLVLRGGLDRESLRLSVVHAGGPAQR
AAWLAAHLDSLPGSGIVYTLTVSQAHDIAALLREQGHTVASYTGSTETAEREQLEADLLG
NRVKALIATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATSSAEVILLPGKED
ADIWRYFASVAFPSEALVRKVIGELEPDRALSTAALEPLVDLGRSRLEMVLKVLDVDGAV
RRVKGGWISTGQPWSYDEERYRNLDAARQREQQAMLDYQSTTECRMVFLRSQLDDPELDG
QGCGRCDNCAGARYTADVDVEAASAVRDQLMRPGVEIAPRKQWPTGLGSLGIGLSGRISG
GAEPGRVIGRLTDLGWGARLRQLLDGPDGEVPDAVVQAAVAVLKAWNWKERPVAVMGLDS
ERHPLLIGSLVTRLAELGRLQNLGTLYYRPQRRPVTAANSAYRVAALVDSWEAPTLDVTG
PVLLVDDLVDTGWTITMATQVLRTAGAPAVLPFAMASVS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgccgacccaatacccaagccccgcaacacctacgcgtactgacgcgcaggccctgctg
gaacagctcgccggcccgggcgcggtgctgcgtgacgaccagtgggtggccatcgaggcc
ctggtcgtccagggccgccgggcgctcgtcgtgcagcgcaccgggtggggcaagtccgcg
gtgtacttcatcgccgccaagctgctgcgggccgccggccgcggcccgaccgtcatcgtc
tcgccgctgctggccctgatgcgcaaccaggtggcggccgccgaacgcgcgggcgtccgg
gccgcgaccatcaactccagcaatgtcaccgaatgggacgaggtgcatcagcgcgtcgcc
tccggcgatctcgacgtgctgctcgtgagtccggagcgcttgaacaatcccgactttcgt
gatgccgtcctgcccgcattggccgccgatgccgggctggtcgtggtcgacgaggcgcac
tgtgtgtccgactgggggcacgacttccgcccggattaccggcgcatccgcaccctgatc
ggcgagttgggtgcgggtatcccggtgctcgccaccaccgcgaccgccaatgaccgcgtg
gtgcaggacgtcgccgcgcagctgggcgtcggcggtggggacaccctggtgctgcgcggt
gggctggaccgcgagtcgctgcgcctgtcggtggtgcacgccggggggccggcgcaacgg
gcggcatggcttgcggcgcatctggattcgctgcccggctcgggcatcgtctacaccctg
acggtgtcgcaggcacatgacatcgccgcgctcctgcgcgagcaggggcacaccgtggcg
tcctacaccggttccaccgagaccgccgagcgtgaacagctggaagccgatctgctgggt
aaccgggtcaaggcgctcattgccacctcggcgctgggcatggggttcgacaaaccggac
ctgggcttcgtcgtgcacctgggcgctccgtcgtcgcccatcgcgtactaccagcaggtc
ggccgtgccggccgcgccacctcgagtgccgaggtgatcctgctgccgggcaaggaggac
gccgacatctggcggtacttcgcgtcggtcgcgttcccgtcggaagccctggtgcgcaag
gtgatcggcgaactcgaacccgaccgggcattgtccacggcggccctggaaccgctggtg
gacctgggccggtcgcggctcgagatggtgctcaaggtgctggacgtcgacggcgcggtg
cgccgcgtcaagggcggttggatcagcaccggccagccgtggtcgtacgacgaggagcgg
taccgcaatctggatgccgcgcggcagcgtgagcagcaggccatgctggactaccaatcg
acgaccgagtgccgaatggtgttcctgcgcagccagctcgacgatcccgagctcgacggc
cagggctgcggccggtgtgacaactgtgcgggtgcgcgctacaccgccgacgtcgatgtg
gaggcggcatcggcggtgcgtgatcaactgatgcggccgggtgtcgagatcgccccgcgc
aaacaatggccgacggggctgggttcgttgggaatcgggttgtccggacgcatctccggt
ggtgctgaaccgggccgcgtcatcgggcgcctcacggacctggggtggggcgcccggctg
cgccagttgctcgacgggcccgacggtgaggttcccgacgccgtcgtgcaggcggccgtc
gcggtcctcaaggcgtggaactggaaagagcgtccggtggccgtgatgggtctggattcc
gagcggcatcctctgctgatcggatcgctcgtcacccgactggcggagctgggccggctg
cagaacctgggcacgctgtactaccggccgcagcggcgacccgtgacggcggccaactcg
gcgtatcgggttgcggcgctggtggattcgtgggaggcacccacgctggacgtgaccggt
ccggtgctgctggtcgacgacctggtcgacaccggctggaccatcaccatggcgacgcag
gtactgcgcaccgccggggcgccggcagtgctgccgttcgcgatggcatcggtcagctga
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