Mycolicibacterium phocaicum: MPHO_52140
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Entry
MPHO_52140 CDS
T07283
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mphu
Mycolicibacterium phocaicum
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mphu03021
]
MPHO_52140
Transcription machinery [BR:
mphu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPHO_52140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
PF0610-like_N
HTH_23
HTH_3
Sigma70_ECF
MarR
HTH_Crp_2
MarR_2
HTH_24
DUF7343
HTH_28
KORA
IF2_N
HTH_ParB
Motif
Other DBs
NCBI-ProteinID:
BBZ58222
LinkDB
All DBs
Position
5369416..5370171
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AA seq
251 aa
AA seq
DB search
MTAEYADVLEMFRQLQGTTEDSADYIAQRDAIIERCLPLADHIARRFEGKGEARDDLLQV
ARIGLINAVKRFDVEMGSDFASFAVPTIMGELRRHFRDNSWSVKVPRRMKELHLQIGTAS
AEMSQRLGRAPTASELATELGIDRDEVLDGLMAGSSYKTTSIDGSAGSGSEDRPSLAETL
GDVDPGLENVEYREALRPLLEELPERERTVLVLRFFESMTQSQIAAKVGISQMHVSRLLA
KTLAQLREKLE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcggagtatgcggacgttctcgagatgttccgtcagctccagggaacaaccgag
gactcagctgactacatcgcgcagcgggacgcgatcatcgagcgctgcttgccgctggcc
gaccacatcgcgcggcgcttcgagggcaagggcgaggcgcgcgatgatctgttgcaggtc
gcgcgtatcggcctcatcaacgcggtgaagcgtttcgacgtcgagatgggttcggacttc
gcctcgttcgcggtccccacgatcatgggagagctgcgtcgccacttccgcgacaacagc
tggtcggtcaaagtcccgaggcggatgaaagagctgcacctgcagatcggcacggccagc
gccgagatgtcgcaacgcctcgggcgcgcacccactgcgtcggaactggccaccgagttg
ggcatcgatcgcgatgaggtcctcgacggcctgatggccgggagctcgtacaaaaccacc
tcgatcgatgggtccgcggggagtggcagcgaggaccgcccgtctctggcggagacgctc
ggcgatgtcgaccccggcttggagaacgtcgagtatcgcgaggcgctccggccgctgctg
gaggagctgccggagcgcgagcgcaccgtgctggtgctgcgattcttcgaatcgatgacg
cagtctcagatcgccgccaaggtgggcatctcccagatgcatgtctcgcggttgctggcg
aaaaccctggcgcagctacgggagaagctggagtag
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