Mycolicibacterium phocaicum: MPHO_55110
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Entry
MPHO_55110 CDS
T07283
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mphu
Mycolicibacterium phocaicum
Pathway
mphu03420
Nucleotide excision repair
mphu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPHO_55110
03430 Mismatch repair
MPHO_55110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphu03400
]
MPHO_55110
Enzymes [BR:
mphu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPHO_55110
DNA repair and recombination proteins [BR:
mphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPHO_55110
MMR (mismatch excision repair)
Other MMR factors
MPHO_55110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBZ58519
LinkDB
All DBs
Position
5672148..5675405
Genome browser
AA seq
1085 aa
AA seq
DB search
MPVTYSPADLAEALGLFTPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY
ATPSQVLGLTFTRKAAGQLLRRVRTRLARLAGSGLLPGVSLADEHATVSTYHAFAGTLLR
EYGLLLPIEPATRLVTETEMWQLAFRVVSDFPGRLDTDKSPAAITQMVLRLAGQLSEHLV
DTDAVRDTHHELERLIHTLPAGPGQRGGPTQWLLNLLATQTERAELVPLIDAVHQRMRDA
QVMDFGTQMSAAARLAEQFPQVGAQLRERYRVVLLDEYQDTGHAQRVALSSLFGGGVDDA
LALTAVGDPIQSIYGWRGASATNLPRFTTDFRLSDGSPAPTLELRTSWRNPPRALRLANE
VSAEARRRSVSVRELLPRPGAEPGTIQCALLDDVVAERDWVADHLARRYHGAVAAGEPVP
TAAVLVRRNADAAPIAEALTARGVPVEVVGLAGLLAIPEVADVVAMLRLVAEPTAGVAAM
RVLTSPRWRFGAADLAALWRRAAELDVPDAARTSGSPAEQAVAQVAPDADHACLADAISD
PGPADRYSPEGHRRLLALAAELSQLRAHLHQPLPDLVAEVRRVLGIDAETRAASGVSEGW
RGTEHLDAFADVVAGYAARPAGDAETSAPIAGLLAYLTAAAEVENGLAPAQVTVASDRVQ
ILTVHAAKGLEWQIVAVPHLVARVFPSTASQRTWLTDAGDLPPLLRGDRAELSEHGVPVL
DTSDVYDRKMLADKIAAHKDLLAQRRTDEERRLLYVALTRAEDTLLLSGYHWGTTAAKPA
GPSDFLIEMRDIIDRAAQEGDPCGEIEQWAPAPAENAVNPLRDNVVECSWPVDPAGSRRG
DVDRGAALVAAALTAEAEEHDDRHGWAADVDALLAERERAQERGPLELPPQLSVSTLVDL
GSDRSGALQRLQRRLPARPDPQALLGTAFHDWVQRYFSAERLFDLDDLPGAVDAELGQAV
AEELADLQAAFALSEWAVRTPTDIEVPFDMVIGDRVIRGRIDAVFADADGGYTVLDWKTG
DPPSTQETLRNKAIQLAVYRLAWSSIQGVPVDSVRAVFHYVRAGQTVAPTDLPGADELAG
LVRLG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgacctacagccccgccgacctcgccgaggcgctcgggctgttcaccccgacc
gatgagcaggccgcggtcatcgccgcaccgcccggaccgctggtggtgatcgccggtgcc
ggcgccgggaagaccgagaccatggccgcccgcgtggtgtggctggtggccaacggctac
gccaccccgtcacaggtcctcggcctgaccttcacccgcaaggccgccgggcagttgttg
cgccgcgtgcgcacccggctggcccgcttggcgggttcgggtctgctgcccggtgtctcg
ctcgccgacgagcacgccaccgtcagcacctatcacgccttcgcgggtaccttgctgcgc
gagtacgggctgctgctgcccatcgagcccgccacccggctggtcaccgaaaccgagatg
tggcagttggcttttcgcgtggtgtccgacttcccgggccgcctggacaccgacaagtcg
ccggccgccatcacccagatggtgctgcgcctggcgggccaactgtccgagcatctcgtc
gacaccgacgccgtacgcgacacccatcacgagctcgaacggctcatccacacccttccg
gcgggacccggccagcgcggtggaccaacccagtggctgctgaatctgctggccacccag
accgagcgggccgaactcgtgccgctgatcgatgcggtgcaccagcggatgcgcgatgca
caggtgatggacttcggcacccagatgtccgccgcggcccgtctggccgagcagtttcca
caggtcggtgcgcaactgcgggagcggtaccgcgtggtcctgctcgacgagtaccaggac
accggacacgcccagcgggtcgcgctctcgtcgttgttcggcggtggcgtcgacgacgcc
ctggcactgacagcggtgggtgaccccatccagtcgatctacggctggcgcggcgcgtcg
gccacgaacctgccccggttcaccaccgacttccggctgtcggacggctcaccggccccg
accctggaactgcggaccagttggcgcaacccgccgcgcgcgctcaggctggccaacgag
gtctccgccgaggcccggcgccgcagcgtcagcgtgcgcgaactgctgccgcggccgggc
gccgagccgggaaccatccagtgcgccttgctggatgatgttgtcgccgaacgcgattgg
gtggccgaccacctggcccgccggtaccacggtgccgtggccgcaggggagccggtgccg
acggccgcggtcctggtgcgccgcaacgccgacgccgcgccgatcgccgaggcgctgacc
gcccgcggcgtgccggtcgaggtggtcggtctggccgggctgctggccattcccgaggtc
gccgacgtggtcgcgatgctgcgcctcgtggccgagccgaccgccggcgtcgccgcgatg
cgggtgctcaccagcccgcgatggcggttcggcgccgcggatctggccgcactctggcgc
cgcgccgccgaactcgacgtgcccgacgccgcgcggacgtccgggtcgcccgccgagcag
gccgtcgcacaggtcgcccccgacgccgaccacgcctgcctggccgacgcgatcagcgat
cccggcccggccgaccgctactcacccgaagggcatcgccggctgctggccctggccgcc
gaactgagccagctgcgcgcacacctgcatcagccgctcccggatctcgtcgccgaggtg
cgtcgagtcctcgggatcgacgccgaaacccgcgcggccagtggcgtttccgagggttgg
cgcggcaccgagcatctcgatgccttcgccgatgtggtcgcgggatacgccgcgcggccg
gccggtgacgccgagacgtccgcgcccatcgccggattgctggcgtatctgacggcggcc
gccgaggtggagaacgggctggccccggcgcaggtgacggtggcctcggaccgggtacag
atcctgacggtgcacgcggccaagggactggaatggcagatcgtcgcggttccgcacctg
gtggcccgggtgttcccgtccaccgcgtcgcagcgcacctggctgaccgatgcgggggac
ctgccgccgttgctgcgcggcgaccgcgccgagctgtccgaacatggggtgccggtgctc
gacacctctgacgtctacgaccggaagatgttggcggacaagatcgccgcgcacaaagac
ctgctcgcgcagcggcgcaccgatgaggaacgccgcctgctctacgtggccctcactcgc
gccgaggacacgctgctgctgtccgggtaccactgggggacgacggccgcgaaacccgcg
gggccctccgacttcctcatcgagatgcgcgacatcatcgaccgggcagcgcaggagggc
gacccctgcggcgagatcgaacagtgggcgcccgcacccgccgagaatgccgtcaacccg
ttgcgggacaacgtcgtcgaatgctcatggcccgtcgacccggcgggctcccgtcgcggt
gacgtcgaccggggtgcggccctggtggctgccgcgctcaccgcagaagccgaggagcac
gacgaccggcacggttgggccgccgacgtggacgcgctgctggccgagcgggaacgggca
caggagcgcggtccgctcgagctgccgccgcagttgtcggtgagcacattggtcgacctg
ggtagtgaccggtccggcgcactgcagcggctgcagcgacggctgcccgcccggcccgac
ccgcaggcgctgctgggcactgcgttccacgactgggtgcagcggtacttctccgccgag
cggctgttcgacctcgacgatctgcccggtgcggtcgacgccgagctggggcaggccgtc
gccgaggagctggcagacctgcaggccgcgttcgccctctcggagtgggcggtccgcacc
ccgaccgacatcgaggtgccgttcgacatggtgatcggcgaccgggtgatccgcggccgt
atcgacgcggtgttcgccgacgccgacggtggttacaccgtgctggactggaagaccgga
gatccgccgtcgacccaggaaaccctgcgcaacaaggccattcagctcgcggtgtaccgc
ctggcctggtcgtccatccagggggtgcccgtcgattcggtgcgggcggtcttccactac
gtgcgcgccgggcagacggtggcacccaccgacctgcccggcgccgacgagctggcgggc
ctagttcgtctggggtga
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