Mycolicibacterium phocaicum: MPHO_55160
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Entry
MPHO_55160 CDS
T07283
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mphu
Mycolicibacterium phocaicum
Pathway
mphu03420
Nucleotide excision repair
mphu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPHO_55160
03430 Mismatch repair
MPHO_55160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphu03400
]
MPHO_55160
Enzymes [BR:
mphu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPHO_55160
DNA repair and recombination proteins [BR:
mphu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPHO_55160
MMR (mismatch excision repair)
Other MMR factors
MPHO_55160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ORC-CDC6-like
AAA_11
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
BBZ58524
LinkDB
All DBs
Position
5678275..5680398
Genome browser
AA seq
707 aa
AA seq
DB search
MMGTMPAEAPPSTLLEDLDDEQREAVLAPRGPVCVLAGAGTGKTRTITRRIAYLVAAGHV
APSQVLAVTFTQRAAGEMRGRLRSLENEIEGAQGTGAVQAMTFHAAALRQLRYFWPRVVG
DTGWELLDSKFAVVAQAANRAGIQASTDDVRDLAGEIEWAKSSLISPELYPEQVAKIERD
IPFDAAKVAAVYAGYEGLKARRDGSALLDFDDLLLHTAAAIENDAAVAGEFRDRYRCFVV
DEYQDVTPLQQRVLNAWVGERDDLTVVGDANQTIYSFTGATPQYLLDFSRRFPDAALIRL
ERDYRSTPQVVSLANQVISAASGRMAASRLQLIGQRDPGPKPVFREHPDEVAEANAVAAA
IKKLIQSGTAPSEIAVLYRINAQSEVYEEALTAAGVAFQVRGGEGFFSRQEIRQALLALQ
RAAGHQGDVAGVELPQLVRDLLEPLGLTAEPPAGTKARERWDALLALVELVEQEVAVRPN
LDLQGLLVELRQRADSRHPPVVQGVTLASLHAAKGLEWDAVFLVGLVDGTLPISHALSHG
ADSEPVEEERRLFYVGITRARVHLTISWALARAAGGRQSRKPSRFLNGLTPQSRREPQQP
QRKRGPAPRCRVCNAALTSSTAILLRRCESCPSNLDEELLGRLKEWRLRTAQEMKVPAYV
VFTDNTLIAIAEALPADNAALVAIPGIGARKLEQYGPDVLALVNGSR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatggggaccatgccagccgaggccccgccgtccacgctcctcgaggacctcgacgac
gaacagcgtgaggccgtcctcgcgccccgcggcccggtatgtgtgctggccggcgccggt
acgggcaagacccgcaccatcacccgacgcatcgcgtatctcgtcgccgccggccacgtt
gcgccgagtcaggtgctggccgtgacgttcacccagcgtgccgcgggcgagatgcgcggc
cggctccgcagcctggaaaacgagatcgagggagcacaaggcaccggcgccgtccaggcc
atgacgttccacgccgcggcgctgcggcaactgcggtacttctggccgcgggtggtcggc
gacaccggctgggagctgctcgacagcaagttcgctgtggtcgcgcaggcggccaatcgg
gcgggcatccaggccagtaccgatgacgtgcgtgacctggccggtgagatcgaatgggcc
aagtcgtcgctgatcagtcccgagctgtatccggagcaggtcgccaagatcgagcgggac
atcccgttcgacgccgccaaggtcgccgcggtgtacgccgggtacgagggtctcaaggcc
cgtcgcgacggatcggcgctgctggacttcgacgatctgctgttgcacaccgccgccgcc
atcgagaacgacgccgccgtcgccggcgagttccgcgaccgttaccgctgtttcgtcgtc
gacgagtatcaggacgtcaccccgctgcagcagcgcgtgctcaacgcctgggtgggagag
cgcgacgacctgaccgtggtcggtgacgccaaccagaccatctactcgttcaccggcgcc
accccgcagtacctcctggatttctccagaaggttccccgatgcggcgctgatccggctg
gagcgcgactatcgcagtacgccacaggtggtgtcgctggccaatcaggtgatctcggcg
gcgtccggccggatggcggccagccggttgcagctcatcggtcagcgtgatcccggtccc
aagccggtgttccgggagcatcccgacgaggtcgccgaggccaacgcggtcgccgccgcc
atcaaaaagctcatccaatccggtacggccccttcggaaatcgcggtgctgtaccgcatc
aacgcgcagtccgaggtgtatgaggaagcgctcaccgcggccggcgtggcgttccaggtg
cgcggtggcgagggcttcttcagccgccaggagattcggcaggcgttgttggcgctgcag
cgcgccgccggccaccagggtgacgtcgccggtgtcgagctgccgcagctggtccgggat
ctgctcgaaccgctgggtctgacggccgagccgccggcgggtaccaaagcccgggaacgc
tgggatgcgttgttggccttggtcgaactggtcgagcaggaagtcgcggtacgtcccaac
ctggacctgcaggggctgctcgtcgagttgcgccagcgtgccgattcgcggcacccaccg
gtcgtgcagggggtgacgctcgcgtcgctgcacgcggccaagggtctcgagtgggatgcg
gtgttcctggtcggcctcgtcgacggcacgctgcccatctcgcacgcgctgtcacacggc
gcggacagcgaacccgtcgaggaggagcgtcgcctcttctacgtcggaatcaccagggcc
agagtgcatttgaccatctcgtgggcactggcccgggccgccggcggacggcagagtcgc
aagccctcgcggttcctcaacgggctgacaccgcagagccgccgcgaaccccaacagccg
caacgtaaacggggtccggcgccgcgctgccgcgtctgcaacgcggcgttgacatcgtcg
accgcgatcttgttgcggcgctgcgaatcgtgcccgtcgaacctcgacgaggagctgctc
ggtcggctcaaggagtggcgcctgcgtaccgcgcaggagatgaaggtgcccgcctacgtg
gtgttcaccgacaacacgttgatcgccattgccgaggcgctgccggccgacaatgccgcg
ctcgtggccattcctgggatcggtgcgcgcaagctggagcaatacggcccggatgtgctg
gctttggtgaacggctcccgttag
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