Methylobacterium phyllosphaerae: MCBMB27_00083
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Entry
MCBMB27_00083 CDS
T04968
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mphy
Methylobacterium phyllosphaerae
Brite
KEGG Orthology (KO) [BR:
mphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mphy03016
]
MCBMB27_00083
Enzymes [BR:
mphy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MCBMB27_00083
Transfer RNA biogenesis [BR:
mphy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MCBMB27_00083
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
APT29374
UniProt:
A0AAE8HW63
LinkDB
All DBs
Position
17528..18715
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AA seq
395 aa
AA seq
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MDLITTTDALRQICTRLAEQPFVTVDTEFMRETTYYPKLCLIQMAAPDGTGVLVDPLAPG
LDLEPFIALMADERTVKVFHSARQDLEIIWLIGGILPHPFFDTQVAAMVCGYGDSVSYEQ
LVNDVAKAKIDKSSRFTDWSRRPLSEAQLSYALSDVTHLVKIYEVLVAELLRTDRGAWLD
EEMAVLTSPETYRADPAQAWRRLSGRMRKPREIAVLMEVAAWRESEAQARNVPRGRILKD
EAVIDIASAAPRNAEALGRLRTIPAGFERSRTGADIVAAVERGLARDTSAVRMPERVRRS
GGNGAIVELLKVLLKAVCETEGVAPKIIATVDDLEAIADDDTAEVPALQGWRRTLFGDKA
LALKQGRLALSVEAGRIVVRPPQGDTAPDGVERAG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatcaccaccactgacgcgctgcgccagatctgcacacgtctcgccgagcaa
cccttcgtgaccgtcgacacggagttcatgcgcgagacgacgtactatccgaaactctgc
ctgatccagatggcggccccggacggcacaggcgtcttggtcgatccgctggcgccgggg
ctcgacctcgaacccttcatcgcgctcatggccgacgagcgtacggtcaaggtgttccat
tccgcccggcaggatctggagattatctggctgatcggcgggatcctgccgcatccgttc
ttcgatacgcaggtcgccgccatggtctgcggctacggcgattccgtctcgtacgagcag
ctcgtcaacgacgtcgccaaggccaagatcgacaagtcttcgcggttcaccgactggtcg
cggcgaccgctctccgaggcgcagttgagctacgcgctgtcggacgtcacccacctcgtg
aagatctacgaggttctcgtggccgagctgctgcgcaccgaccggggcgcgtggctcgac
gaggaaatggcagtgctgacctcgcccgagacgtaccgtgccgatcccgcccaggcgtgg
cggcggctctccgggcggatgcgcaagccgcgggaaatcgccgtgctgatggaagtggcc
gcgtggcgcgagagcgaggcgcaggcgcgcaacgttccgcgcgggcggatcctgaaggac
gaagcggtcatcgatatcgcatccgcggcgcctcggaacgccgaggcgctcgggcggctg
cggacgatcccggcgggattcgagcggtcccggaccggggccgacatcgtcgctgccgtg
gagcgcggcctcgctcgcgacaccagcgccgtccggatgcccgagcgggtgcggcggagc
gggggcaacggggccatcgtcgagttgctgaaagtgctgctcaaagcggtctgcgagacg
gagggcgtcgcgcccaagatcatcgcgacggtcgacgacctggaggcgatcgccgatgac
gataccgccgaggttccggccctccagggctggcggcggaccctgttcggggacaaggcc
ctggctctgaagcaggggcgtctggcgctctccgtcgaggccggccgcatcgtggtgcgc
ccgccccagggtgacaccgcgccggacggcgtcgagcgggccggatga
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