Methylobacterium phyllosphaerae: MCBMB27_01644
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Entry
MCBMB27_01644 CDS
T04968
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mphy
Methylobacterium phyllosphaerae
Pathway
mphy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mphy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCBMB27_01644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mphy03019
]
MCBMB27_01644
Messenger RNA biogenesis [BR:
mphy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MCBMB27_01644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
APT30935
UniProt:
A0AAE8HNH0
LinkDB
All DBs
Position
complement(1763714..1765387)
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AA seq
557 aa
AA seq
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MAMGQEELVFLPLGGVGEIGMNAALYGFGPEKGRKWIMVDCGMGFAGEEQMPGVDLMFPD
LSFIEERRKDLLGIFITHAHEDHIGAISELWPRLKVPVYATRFAKNLLETRRLSEPGAPK
VELREVKPGRRVTVGPFELEYVPVSHSIPESNAIAIRTAAGLVLHTGDWKIDPTPVAGSV
TSPEAFTALGDEGILAIVCDSTNVVREGFSPSEKTVAETLKTLIADAPHRVAVTTFASNV
ARIRAVAEAAVACGREVIAVGRAMDRVIDVARECGYLDGLPEFRRADSWKSLPRERVVAL
LTGSQGEPRAALARVSRRDHPDISLTAGDQVIFSSRAIPGNERDVGSIINDLIEQGVEVI
TDRTDLVHVSGHPRRDEMVEMYKWTRPGTAIPVHGEALHLDEHARFARAQGVQNVVKARN
GSLIRLSPGTPAVVDHVKAGRLFKDGDVLIDEKDRAIPERRKLMQAGLVSVAIAIDEDGV
VLGEPAVDIIGLPNRGRSGEPLIETVVDAVSRTLSGMSRGKLKDSESVEKTVDRAVRTAV
NEVWGKKPACHVQVVEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggacaggaggagctggtcttcctgccgctcggcggcgtgggcgagatcgga
atgaatgcggcgctctacgggttcggcccggagaagggccggaaatggatcatggtcgat
tgcggcatgggcttcgccggcgaggagcagatgccgggagtggacctgatgttccccgac
ctctccttcatcgaggagcggcgcaaggacctgctggggatcttcatcacccacgcgcac
gaggaccatatcggggcgatctcggagctgtggccccggctcaaggtcccggtctacgcg
acccgtttcgccaagaacctgctggagacccggcgcctctccgagcccggcgccccgaag
gtcgagctgcgtgaggtcaagcccggccggcgtgtgaccgtcggaccgttcgagctcgag
tatgtgccggtctcgcactcgatcccggaatcgaacgccatcgcgatccgcaccgccgcg
ggcctcgtgctccacaccggcgactggaagatcgacccgaccccggtggccggctcggtc
acctcgccggaggcgttcacggcgctcggcgacgagggtatcctcgccatcgtctgcgac
tcgaccaacgtcgtgcgcgagggcttctcgcccagcgagaagaccgtggccgagaccctc
aagacgctgatcgcggacgccccccaccgggtcgcggtgaccaccttcgcgtcgaacgtc
gcccgcatccgcgcggtcgccgaagccgccgtcgcctgcggccgcgaggtcatcgcagtc
ggccgcgccatggaccgggtgatcgatgtggcccgcgaatgtggctacctcgacggcctg
ccggaattccgccgcgccgattcctggaagagcctgccgcgggagcgggtcgtggccctg
ctcaccggatcgcagggcgagccgcgggcggcgttggcccgggtctcccgccgggaccat
ccggatatcagcctcaccgccggtgatcaggtgatcttctcctcgcgcgccattcccggc
aacgagcgcgatgtcggatcgatcatcaacgacctgatcgagcagggcgtcgaggtgatc
accgaccgcaccgacctcgtccacgtctccggccacccgcgccgggacgagatggtcgag
atgtacaagtggacccgtcccggcacggcgatcccggtccacggcgaggccctgcacctc
gacgagcatgcccgcttcgccagggcgcagggcgtgcagaacgtggtcaaggcccgcaac
ggcagcctgatccgcctgagccccggcacgccggcggtggtcgaccacgtgaaggccggc
cggctgttcaaggacggcgacgtcctgatcgacgagaaggaccgggcgatcccggaacgg
cgcaagctcatgcaggccggcctggtctcggtggcgatcgccatcgacgaggacggcgtg
gttctcggcgagccggcggtggacatcatcggcctgccgaaccgcggccggtccggcgag
ccgttgatcgaaacggtcgtggatgcggtctcccgcaccctgtcggggatgtcgcggggc
aagctcaaggactcggagagcgtcgagaagacggtcgaccgggcggtgcgcaccgcggtc
aacgaggtctggggcaagaagcccgcctgccacgtgcaggtggtcgaagtttaa
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