Methylobacterium phyllosphaerae: MCBMB27_03022
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Entry
MCBMB27_03022 CDS
T04968
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mphy
Methylobacterium phyllosphaerae
Pathway
mphy03030
DNA replication
mphy03410
Base excision repair
mphy03420
Nucleotide excision repair
mphy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCBMB27_03022
03410 Base excision repair
MCBMB27_03022
03420 Nucleotide excision repair
MCBMB27_03022
03440 Homologous recombination
MCBMB27_03022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mphy03032
]
MCBMB27_03022
03400 DNA repair and recombination proteins [BR:
mphy03400
]
MCBMB27_03022
Enzymes [BR:
mphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCBMB27_03022
DNA replication proteins [BR:
mphy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MCBMB27_03022
DNA repair and recombination proteins [BR:
mphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MCBMB27_03022
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCBMB27_03022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
APT32313
UniProt:
A0AAE8HNP2
LinkDB
All DBs
Position
complement(3214126..3217272)
Genome browser
AA seq
1048 aa
AA seq
DB search
MTDAKPEIKSVGPGDQVILVDGSSFIFRAYFQSINQDQKYNSRPSDGLPTGAVRLFCTKI
AQFLQDGAAGTMPTHLGIVFDKSEGSFRKEMFPDYKGHRPDAPDDLKRQMPLMRDAVRAF
GLHAVELERYEADDLIATYTRQAEARGAGVIIVSSDKDLMQLVGPQVRFYDFESGAKGKP
GYRPERNLDVEAIIAKWEGLQPNQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEFGSL
EALLERAGEIKQPKRRETLLANVDQAKLSRKLVALMEDVPVPVPLDELGVPKPDPEKLVG
FLKAMEFNTLTRRIAQMLHVDPEAVKPDPRLLPGARPHGYGNGAGGSDAVPFFGDSVPPD
PETAAAGAERPPGAAPPEGGAVDPFADLDLPDAPAKPRAPVEATPGNVVAARAAEAVAPF
DTAAYETVTSLEQLDAWIAEAEEAGVIAVDTETDALDAHKAGLVGVSLAVSTGRACYIPL
AHVQAAKVQADATDLFGEGAAPSDVVEPVPGQIPLKDAVARLKPLLENPGVLKVGQNLKY
DWVVLARYGVEVAPFDDTMLISYVLDAGKGGHGMDELARRHLGHQPITFSDVAGTGRNKV
SFDRVAIDKATAYAAEDADVTLRLWRMMKPRLVAEHRVAVYETLERPLLPVIARMEQRGI
RVDRDMLSRLSGDFSQILVRLEEEIQEDAGEKFSVGSPKQIGDILFGKMGLPGAKKTPSG
QWATPATLLEELAQAGHELPKKILEWRQLSKLKSTYTDSLQTHADRETARVHTSFSLAAT
TTGRLSSSEPNLQNIPIRTEEGRRIRRAFVAAPGNRLISADYSQIELRLLAHMADIPELR
KAFADGIDIHAATASAMFGVPLKDMTPDLRRRAKTINFGIIYGISAFGLADRLGIGREEA
SAFIKQYFEQFPGIRDYIDSTKKSCRDKGYVTTLFGRVCHYPQIRSNNPSERASVERQAI
NAPIQGSAADIIRRAMTRMEGALADEKLGVRMLLQVHDELVFEAAEDEVERAIPIIRGVM
EEAPAPALTLRVPLVVEANAAGNWQEAH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgaagcccgaaattaagtccgtgggccccggcgatcaggtgatcctggtc
gacggctcgtcgttcatcttccgggcctatttccagtcgatcaatcaggaccagaagtac
aattcgcgcccctccgacgggctgcccaccggcgccgtgcggctgttctgcacgaagatc
gcgcagttcctgcaggacggcgccgccggcacgatgccgacgcatctcggcatcgtcttc
gacaagtcggaagggtcgttccgcaaggagatgttcccagactacaagggccaccgcccg
gacgcgcccgacgacctcaagcggcagatgcccctgatgcgcgacgcggtgcgggccttc
ggcctgcatgcggtggagctggaacgctacgaggccgacgacctcatcgcgacctatacc
cgccaggccgaggcacggggcgcgggcgtcatcatcgtctcctccgacaaggacctgatg
cagctcgtgggaccgcaggtgcggttctacgatttcgaatccggtgcaaagggcaagccg
ggctaccggcccgagcgcaacctcgatgtcgaggcgatcatcgccaagtgggaggggctt
caacccaaccagatcggcgacgcgctggcgctgatcggcgacacctccgacaacgtaccg
ggcgtccccggcatcggcttgaagaccgccgcggcgctgatcaaggagttcggcagcctc
gaggcgctgctggagcgggcgggcgagatcaagcaacccaagcgccgggaaaccctgctc
gccaacgtcgatcaggctaagctgtctcgaaaactcgtggcgctgatggaggatgtgccg
gtcccggtgccgctcgacgaactcggcgtgccgaagcccgacccggagaagctcgtcggc
ttcctgaaggcgatggagttcaacaccctgacgcgccgcatcgcccagatgctgcacgtc
gaccccgaggcggtgaagcccgatccgcggctcctgcccggcgcccggccgcacggctac
ggcaacggggccggcggcagcgacgcggtgccattcttcggcgattccgtgccgccggat
cccgagaccgcggcggccggggccgagcgcccgccgggcgccgcaccgcccgagggcggc
gcggtggaccccttcgcggatctcgacctgccggacgcgcccgccaagccccgggccccc
gtcgaggcgacgcccggcaacgtcgttgcggcccgggccgcggaggccgtggcccccttc
gacaccgccgcctacgagaccgtcacgtctctggagcagctcgacgcctggatcgccgag
gccgaggaggccggtgtgatcgcggtcgacaccgagacggacgcgctcgacgcccacaag
gccggcctggtcggcgtctcgctggcggtgtccacgggacgggcctgctacatcccgctg
gcgcacgtgcaggccgccaaggtgcaggccgacgccaccgacctgttcggcgaaggggcc
gcgccctccgacgtggtcgagccggtcccgggccagatccccctgaaggatgccgtcgcc
cgactgaagccgcttctggagaatcccggcgtcctgaaggtcggccagaacctcaaatac
gattgggtcgtgctcgcccgctacggcgtcgaggtggcgcccttcgacgacacgatgctg
atctcctacgttctcgatgccgggaagggcggccacggcatggacgagctggcccgccgc
catctcggccaccagccgatcacgttctcggatgtcgccggcaccggccgcaacaaggtg
agcttcgaccgggtcgcgatcgacaaggccaccgcctacgcggccgaggatgcggacgtg
acgctccgcctgtggcggatgatgaagccgcgcctcgtcgccgagcaccgggtcgcggtc
tacgagaccctggagcgcccgctcctgccggtcatcgcccggatggagcagcgcggcatc
cgggtcgaccgggacatgctgagccgcctctcgggggatttctcgcagatcctcgtgcgc
ctggaggaggaaatccaggaggatgccggcgagaaattctcggtgggctcgccgaagcag
atcggcgacatcctgttcgggaagatgggcctgccgggcgccaagaagacgccctccggc
caatgggccacaccggccacgctcctcgaagaactggcccaggccgggcacgaactgccc
aaaaagatcctggagtggcgccagctctcgaagctgaaatccacctatactgactcgctc
cagacccatgcggatcgcgagaccgcgcgggtccacacctcgttttcgctggcggcgacc
actacgggtcggctgtcctcctccgagccgaacctgcagaacatcccgatccgcaccgag
gagggccggcgcatccgccgcgccttcgtggccgcgcccggcaaccggctgatctcggcg
gattattctcagatcgagctgcgtctcctcgcccacatggccgatatcccggaactccgg
aaggcgttcgcggacgggatcgacatccacgcggccaccgcctcggcgatgttcggcgtg
ccgctcaaggacatgacgcccgacctgcggcgccgggcgaagaccatcaatttcggcatc
atctacggcatctcggccttcgggctcgccgaccggctcggcatcggccgcgaggaggct
tcagcgttcatcaagcagtatttcgagcagttccccgggatccgcgactacatcgattcg
accaagaagagctgccgggacaagggctacgtcaccaccctgttcggccgggtatgccac
tatccgcagatccgctccaacaacccgtccgagcgcgccagcgtcgagcggcaggcgatc
aacgcgccgatccagggctcggccgccgacatcatccgccgggccatgacccggatggaa
ggggctttggccgacgagaagctcggggtgcgcatgctcctgcaggtccacgacgagctg
gtcttcgaggctgccgaggacgaggtggagcgggcgatcccgatcatccgcggcgtgatg
gaggaagcaccggcgccggccctgacgctgcgggtgccgctggtggtggaggccaacgcg
gcggggaactggcaggaggcgcattag
DBGET
integrated database retrieval system
