Methylobacterium phyllosphaerae: MCBMB27_03199
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Entry
MCBMB27_03199 CDS
T04968
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mphy
Methylobacterium phyllosphaerae
Pathway
mphy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCBMB27_03199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphy03400
]
MCBMB27_03199
Enzymes [BR:
mphy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MCBMB27_03199
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MCBMB27_03199
DNA repair and recombination proteins [BR:
mphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MCBMB27_03199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Pentapeptide
Motif
Other DBs
NCBI-ProteinID:
APT32490
UniProt:
A0AAE8HP12
LinkDB
All DBs
Position
3412650..3413573
Genome browser
AA seq
307 aa
AA seq
DB search
MRRHARKVAREMPELPEVETVRRGLAPALVGARFSRVTLRRANLRFPFPDRFAARLEGRT
VTDLARRAKYLTAALDSGETLVMHLGMSGRFDVALPDGSNLSPGDFYLEGAQGTPKHDHV
VMAMSTGATVTYNDARRFGFMDLVPSADLARCRHFARMGIEPLDGLTGAVIAQLFRHKIT
PLKAALLDQRLIAGLGNIYVCEALHRARLHPEAPAGSLVRPDGRPTPKANALAKAIVKVL
QEAVEAGGSTLRDYAHTDGSAGAFQHAFRVYDRVGLSCSRPGCGGSITRIVQANRSTFFC
ATCQPPD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccacgcacgcaaagtcgcgagagagatgccggagcttcccgaagtcgagacg
gtgcggcggggcttggcgcccgccctggtcggagcccgcttcagccgtgtcaccctgcgc
cgggccaacctgcgcttccccttcccggatcgcttcgccgcccggctggaggggcggacc
gtcacggacctcgcgcgccgggcgaaatacctcaccgccgcgctcgactcgggcgagacc
ctggtcatgcatctcggcatgagtgggcggttcgacgtggccctgccggacggcagcaac
ctgtcgccgggggatttctacctcgaaggggcccagggcacgcccaagcacgaccatgtg
gtcatggcgatgagcaccggcgccacggtgacctacaacgacgcccgccgcttcggcttc
atggatctggtcccgagcgcggatctcgcccgctgccgccacttcgctaggatgggcatc
gagcccctcgacggactgacgggcgcggtgatcgcgcagctcttccgccacaagatcacg
ccgctgaaggccgccctgctcgaccagcgcctgatcgcaggcctcggcaacatctacgtg
tgcgaggcgctgcaccgggcgcgcctgcaccccgaggccccggccgggagcctcgtccgg
cccgacgggcgcccgacgcccaaggccaacgccctcgccaaggcgatcgtgaaggtcctg
caggaggccgtggaggccggcggctcgaccctgcgcgactacgcccacacggatggcagc
gcgggggcgttccagcacgccttccgggtttacgaccgagtcggattgtcctgcagccgg
ccgggatgcggcggttccatcacccgcatcgtccaggcgaaccgctcgactttcttctgc
gcgacctgccagcccccggactga
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integrated database retrieval system
