Methylobacterium phyllosphaerae: MCBMB27_03314
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Entry
MCBMB27_03314 CDS
T04968
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mphy
Methylobacterium phyllosphaerae
Pathway
mphy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mphy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCBMB27_03314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mphy03021
]
MCBMB27_03314
03400 DNA repair and recombination proteins [BR:
mphy03400
]
MCBMB27_03314
Enzymes [BR:
mphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCBMB27_03314
Transcription machinery [BR:
mphy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCBMB27_03314
DNA repair and recombination proteins [BR:
mphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCBMB27_03314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RelB
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
APT32605
UniProt:
A0AAE8L8Y0
LinkDB
All DBs
Position
complement(3536078..3540202)
Genome browser
AA seq
1374 aa
AA seq
DB search
MANTLVGRKRIRKFFGKIKEVAEMPNLIEVQKASYDQFLMVDEPEGGRADEGLQSVFKSV
FPISDFASTALLEFVRYTFEAPKYDVDECRQRGITFAAPLKVTLRLIVFDVDPDTQAKSV
KDIKEQDVYMGDMPLMTENGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAA
RIIPYRGSWLDVEFDAKDIVHVRIDRKRKLPATSLLYALGLDGEEILSTFYNKVVYDRDG
ADWRVPFDAERMKGMKATVDLIDADSGEVVLEAGKKLNARNARQITDKGTKFLKATDEDL
VGQYVAEDLVNAQTGEIWAEAGEEITDKLLKSLDDVGITELPVLDIDHVNVGPYIRNTLA
VDKNSNREGALFDIYRVMRPGEPPTLETAEAMFHSLFFDSERYDLSAVGRVKMNMRLDLD
AADTVRTLRKEDMLAVVKALVELRDGKGEVDDIDHLGNRRVRSVGELMENQYRLGLLRME
RAIRERMSQVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIETPFR
RVRDGVVTDEVAYLSAMEEAKYYVAQANAQMDEARKLTEDLVVCRRAGEVIVVGPERVDL
MDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGTGMEAVVARDS
GAAIAARRAGIIDQVDATRIVIRATEEADANKPGVDIYRLQKFQRSNQSTCITQKPLVRV
GEFVKKGEIIADGPSTEFGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIHI
EEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVNAGDILVGKITPKGES
PMTPEEKLLRAIFGEKASDVRDTSLRVPPGVTGTIVEVRVFNRHGVDKDERAQAIEREEI
ERLAKDRDDEQAILDRNTYARLADVLIGQAPVAGPKGFRKDTTLTRELINDYPRSQWWQF
AVIEDRLMTEMEAMQKQYDESKKRLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKI
QPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWA
AAGLGRKVSKAVDAYLKSQDIAPLREEMKAIYSPGELDGLTDEELAEAGNNVRRGVPMAT
PVFNGAKEADIEQMLEMAGLDRSAQSTLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIH
ARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKV
YEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELTSSKKAANDQLEPPADAAE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggccaacacgctggtcggtcgcaagcgcattcggaagttcttcggcaagatcaaggaa
gttgccgagatgccgaacctcatcgaggttcagaaggcgtcctacgaccagttcctgatg
gtcgacgagcccgagggtgggcgcgccgacgaggggctgcagagcgtgttcaagtcggtg
ttcccgatttccgacttcgcctccacggccctgctcgagttcgtgcgctacaccttcgag
gcgcccaagtacgatgtcgacgagtgccgccagcgcggcatcaccttcgcggccccgctg
aaggtcacgctgcgcctcatcgtgttcgatgtcgatcccgacacgcaggcgaagtcggtc
aaggacatcaaggagcaggacgtctacatgggcgacatgcccctgatgacggagaacggc
accttcatcgtcaacggcaccgagcgcgtgatcgtctcgcagatgcaccgctcgccgggc
gtgttcttcgaccacgacaagggcaagacccattcctcgggcaagctcctgttcgccgcc
cgcatcatcccgtaccggggctcctggctcgacgtcgagttcgacgccaaggacatcgtc
cacgtccgcatcgaccggaagcgcaagctgccggcgacgtcgctgctctacgccctcggc
ctcgacggcgaggagatcctgtcgaccttctacaacaaggtcgtctatgaccgcgacggc
gccgactggcgcgtgcccttcgacgccgagcgcatgaagggcatgaaggccaccgtcgac
ctgatcgacgccgattccggcgaggtcgtgctcgaggccggcaagaagctcaacgcccgc
aacgcccgtcagatcaccgacaagggcaccaagttcctcaaggccaccgatgaggatctc
gtcggccagtacgtggccgaggatctcgtcaacgcgcagaccggcgagatctgggccgag
gccggcgaggagattaccgacaagctcctgaagagcctggatgatgtcggcatcaccgag
ctcccggtgcttgacatcgaccacgtcaatgtcggcccctacattcgcaacacgctggcg
gtggataagaactccaaccgcgagggcgcgctgttcgacatctaccgggtcatgcgcccg
ggcgagccgccgaccctcgagaccgccgaggcgatgttccactcgctgttcttcgactcc
gagcggtacgacctctcggccgtcggccgcgtgaagatgaacatgcgcctcgacctcgac
gccgccgacaccgtgcgcaccctccgcaaggaggacatgctcgcggtggtgaaggcgctc
gtggagctgcgcgacggcaagggcgaggtcgacgacatcgaccacctcggcaaccgccgc
gtccgctcggtgggcgagctcatggagaaccagtaccgcctgggcctcctgcgcatggag
cgcgcgatccgcgagcgcatgagccaggtcgatatcgacacggtcatgccgcaggatctc
atcaacgcgaagcccgccgccgcggccgtgcgcgagttcttcggctcgtcgcagctctcg
cagttcatggatcagaccaacccgctctccgaggtgacgcacaagcgccgcctgtcggcg
ctcggcccgggcggtctgacccgcgagcgcgccggcttcgaggtgcgcgacgtgcacccg
acccattacggccgcatctgcccgatcgagacgccggaaggcccgaacatcggcctgatc
aactcgctcgccaccttcgcgcgggtgaacaagtacggcttcatcgagaccccgttccgc
cgcgtccgcgacggcgtggtcaccgacgaggtcgcctacctctcggccatggaggaggcg
aagtactacgtcgctcaggccaacgcccagatggacgaggcccgcaagctcacggaggat
ctcgtggtctgccgtcgggccggcgaggtgatcgtcgtggggcccgagcgcgtcgatctc
atggacgtgtcgccgaagcagctcgtctcggtcgccgcggcgctgatcccgttccttgag
aacgacgacgccaaccgcgcgctcatgggctcgaacatgcagcgccaggcggtgccgctc
gtccgcgccgacgccccgttcgtgggcaccggcatggaggcggtggtcgcccgggattcc
ggcgccgccatcgcggctcgccgggccggcatcatcgatcaggtggacgccacccgtatc
gtcatccgcgccaccgaggaggccgacgccaacaagcccggcgtcgacatctaccgcttg
cagaagttccagcgctccaaccagtcgacctgcatcacgcagaagccgctggtccgcgtc
ggcgagttcgtgaagaagggcgagatcatcgccgacggtccctcgaccgagttcggcgag
ctggcgctcggccggaacgtgctcgtcgcgttcatgccgtggaacggctacaacttcgag
gactcgatcctgctttccgagcggatcgtgaaggatgacgtgttcacctcgatccacatc
gaggagttcgaggtgatggcccgcgacaccaagctcgggccggaggagatcacccgcgac
atcccgaacgtctccgaggaggcgctcaagaacctcgacgaggccggcatcgtctatatc
ggcgccgaggtgaatgcgggcgacatcctcgtcggcaagatcaccccgaagggcgagagc
ccgatgacgccggaggagaagctcctccgcgccatcttcggcgagaaggcctcggacgtg
cgcgacacctcgctgcgggtgccgccgggcgtcaccggcacgatcgtcgaggtccgcgtg
ttcaaccggcatggcgtcgacaaggacgagcgcgcccaggcgatcgagcgcgaggagatc
gagcggctcgccaaggaccgcgacgacgagcaggcgatcctcgaccgcaacacctacgcg
cgcctcgcggacgtgctgatcggtcaggcgccggtggccggcccgaagggcttccggaag
gacaccacgctcacccgcgagctgatcaacgactacccgcgctcgcaatggtggcagttc
gccgtcatcgaagaccgtctcatgaccgagatggaggcgatgcagaagcagtacgacgag
tcgaagaagcgcctcgagcagcgcttcctcgacaaggtcgagaagctgcagcgcggcgac
gagctgccccccggcgtcatgaagatggtcaaggtcttcgtggcggtgaagcgcaagatc
cagccgggcgacaagatggccggccgtcacggcaacaagggtgtcgtgtcgcggatcgtg
ccgatcgaggacatgccgttcctggaggacgggacgcatgccgacatcgtgctcaacccg
ctgggcgtgccctcgcgcatgaacgtcggccagatcctggagacgcacctgggctgggcg
gctgcgggcctgggtcgcaaggtgtcgaaggcggtggatgcctatctgaagtcgcaggac
atcgcgccgctgcgggaggagatgaaggcgatctactccccgggcgagctcgacgggctg
acggacgaggagctggccgaggccggcaacaacgtccgccgtggcgtgccgatggccacg
ccggtgttcaacggcgccaaggaagccgacatcgagcagatgctggagatggccgggctg
gaccgctcggcgcagtcgacgctctacgacgggcggaccggcgagcccttcgaccgcaag
gtcacgatgggctacatctacatgctgaagctccaccacctcgtggacgacaagatccac
gcgcgctcgatcggcccgtactcgctcgtcacccagcagccgctgggcggcaaggcgcag
ttcggcggccagcgcttcggtgagatggaggtctgggcgctggaggcctacggcgcggcc
tacacgctgcaggagatgctcacggtgaagtcggacgacgtggccggccgcaccaaggtc
tacgaggcgatcgtccgcggcgacgacacctttgaggccggcatccccgagagcttcaac
gtgctcgtcaaggagatgcgctcgctcggcctcaacgtcgagctgacgtcttcgaagaag
gccgcgaacgatcagctggagccgccggccgacgcggccgagtag
DBGET
integrated database retrieval system
