Methylobacterium phyllosphaerae: MCBMB27_03793
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Entry
MCBMB27_03793 CDS
T04968
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mphy
Methylobacterium phyllosphaerae
Pathway
mphy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mphy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCBMB27_03793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mphy03021
]
MCBMB27_03793
03019 Messenger RNA biogenesis [BR:
mphy03019
]
MCBMB27_03793
Transcription machinery [BR:
mphy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MCBMB27_03793
Messenger RNA biogenesis [BR:
mphy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCBMB27_03793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA_25
AAA
AAA_14
Motif
Other DBs
NCBI-ProteinID:
APT33084
UniProt:
A0AAE8HX43
LinkDB
All DBs
Position
complement(4041749..4043098)
Genome browser
AA seq
449 aa
AA seq
DB search
MTPNPDALADIETAEPADAPTMPAALEGVREVKLQDLKSKTPTDLTAFAEEVEVENASTM
RKQELMFAILKQLAAKEVEIIGSGTVEVLQDGFGFLRSSDSNYLPGPDDIYISPTQIRRF
GLRTGDTVEGPIRGPKDGERYFALLKVNTINFENPEKIKHKVHFDNLTPLFPTKRFKLEL
DNPTKKDFSPRIIDIVAPIGKGQRALIVAPPRTGKTVLMQNIAQSITLNHPECYLIVLLI
DERPEEVTDMQRSVKGEVIASTFDEPATRHVQVAEMVIEKAKRLVEHGRDVVILLDSITR
LGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDE
VIFEEFKGTGNSEIILDRKVSDKRIFPAIDITRSGTRKEELLVPPDSLKKTYVLRRILNP
MGVTDAIEFLLDKLRQTKSNSDFFDSMNT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaaaccccgacgccctcgccgacatcgagaccgcggagccggccgatgcgccc
accatgcccgccgccctcgagggcgtccgcgaggtcaagctccaggacctcaagtcgaag
acgcccaccgacctgacggccttcgccgaggaggtcgaggtcgagaacgcctcgaccatg
cggaagcaggagctgatgttcgccatcctgaagcagctcgctgccaaggaggtcgagatc
atcggctcgggcaccgtcgaggtgctgcaggacggcttcggcttcctgcgctcctccgac
tcgaactacctgccgggccccgacgacatctacatctcgccgacccagatccgccgcttc
ggcctgcgcaccggcgacaccgtcgagggcccgatccgcggccccaaggacggcgagcgc
tacttcgcgctcctcaaggtcaacacgatcaacttcgagaacccggagaagatcaagcac
aaggtccacttcgacaacctgacgccgctcttcccgaccaagcggttcaagctcgagctg
gacaacccgaccaagaaggatttctccccgcggatcatcgacatcgtggcgccgatcggc
aagggccagcgcgccctgatcgtggcgccgccgcgcacgggtaagaccgtgctgatgcag
aatatcgcgcagtcgatcacccttaatcaccccgagtgctacctgatcgtgctgctcatc
gacgagcggcccgaggaggtcaccgacatgcagcgctcggtgaagggcgaggtcatcgcc
tcgaccttcgacgagccggccacccgccacgtgcaggtcgccgagatggtgatcgagaag
gccaagcgcctcgtggagcacgggcgcgacgtcgtgatcctgctcgactcgatcacccgc
ctcggccgcgcctacaacaccgtggtgccgtcctccggcaaggtgctgaccggcggtgtc
gacgccaacgccctgcagcggcccaagcgcttcttcggcgcggcccgcaacatcgaggag
ggcggctcgctctcgatcatcgccaccgcgctcatcgacaccggctcgcgcatggacgag
gtgatcttcgaggagttcaagggcaccggcaactccgagatcatcctggaccgcaaggtc
tccgacaagcgcatcttcccggcgatcgacatcacccgctcgggcacccgcaaggaggag
ctgctggtcccgccggattcgctcaagaagacctacgtgctgcgccgcatcctcaacccg
atgggcgtcaccgacgcgatcgagttcctgctcgacaagctgcgccagaccaagagcaac
agcgacttcttcgactcgatgaacacctga
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