Methanolacinia petrolearia: Mpet_0947
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Entry
Mpet_0947 CDS
T01312
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mpi
Methanolacinia petrolearia
Pathway
mpi03410
Base excision repair
mpi03430
Mismatch repair
mpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mpet_0947
03430 Mismatch repair
Mpet_0947
03440 Homologous recombination
Mpet_0947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpi03400
]
Mpet_0947
DNA repair and recombination proteins [BR:
mpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mpet_0947
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mpet_0947
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mpet_0947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
RepB_C
Motif
Other DBs
NCBI-ProteinID:
ADN35714
UniProt:
E1RJR7
LinkDB
All DBs
Position
complement(960049..961428)
Genome browser
AA seq
459 aa
AA seq
DB search
MSLDKDISAVAGIIHDSKKVTIISHIDADGITSEAIMRQAVARAGIEVRSVFVRQLEPIT
MKHVPDDDSLKLFIDLGAGQQNLLEERGLSDREVVIIDHHVTQDVDTQYIQANGLPYGHE
KLSAAGVGYLVAREIDDVNIDLAKLAVIGNVGDMMARENCGLIGPARKIADDGAEFGNVE
IVKDDLNCYGISTRPLHILLSFADDPHIPGISNRPGEAQNMLTYEAGIQLHKPNGKWKVW
EDLDEDERKSIMGRLALKLHSAGEPLERLRGEHYIFPDERKYTPLRNASEYATMLNACGR
WVKPYTGSAVCCGDRGEEYREAEHMLRHHRKIIREMMEYILDKGVTEYSNLQYIHVGSRF
PDTIVGIGAGMALSKLNRRLPIMVLCYLSDDPELVKVSMRTNETMVQAGVDLQAALLEAS
EKLGGAGGGHKIAAGAYIPKESEEGFAESVNRILRQQLA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgacaaggacatctccgcagtcgccgggataatacatgattccaaaaaagta
acgataatctcccacatcgacgccgacgggataaccagcgaggcgatcatgaggcaggcc
gtagcaagggccggcattgaggtcaggtcagtcttcgtcaggcagctcgagccgatcacc
atgaagcacgtgccggacgacgactccctcaagctcttcatagacctcggggcgggccag
caaaacctgcttgaggagcggggcctctctgaccgtgaagtcgtaatcatcgatcaccac
gtgacacaggacgtcgatacccaatatattcaggcgaacggactcccttacggtcacgaa
aagctctcggccgcaggagtaggatacctcgtcgcaagagagatcgacgacgtcaacatc
gacctcgcgaagctcgccgtcataggaaacgtcggcgatatgatggcccgcgagaactgc
ggattaatcggccccgcccggaagatcgccgacgacggcgcagagttcggcaacgtcgag
atcgtaaaggacgacctcaactgctacgggatatccacgagacccctccatatactactc
tccttcgcagacgaccctcacatccccggaatatccaaccgtcccggcgaggcccagaac
atgctgacatacgaggcgggaatacagctccataagcccaacggcaagtggaaggtctgg
gaggatctggacgaggacgagaggaagagcatcatgggccgcctcgcactcaaacttcat
tccgcaggcgaacctctcgaacgtctcaggggcgagcactacatcttccccgacgagagg
aaatacacgccgctccggaacgcgtccgaatacgcgacgatgctgaacgcatgcggacga
tgggtcaagccctacaccggaagtgcagtctgctgcggggacaggggcgaggagtacagg
gaggccgagcacatgctcaggcatcataggaagatcatccgcgagatgatggagtacatc
ctcgacaagggcgttaccgaatattccaacctccagtatatccacgtcggcagcaggttc
ccggacaccatcgtcgggatcggggcgggaatggcgctctcgaagctcaaccggcggctc
ccgattatggtattatgctatctctccgacgaccccgaactcgtcaaggtctcaatgcgg
accaacgagacgatggtgcaggcgggagtcgatctccaggccgcactgctcgaagcctcc
gagaaactcggcggtgcaggcggaggacataagattgcggcgggcgcatatattccaaaa
gaatccgaagaggggtttgcagaaagtgtcaacagaatcctcagacagcagctcgcttaa
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