Methanolacinia petrolearia: Mpet_1701
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Entry
Mpet_1701 CDS
T01312
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mpi
Methanolacinia petrolearia
Brite
KEGG Orthology (KO) [BR:
mpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpi03016
]
Mpet_1701
Enzymes [BR:
mpi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Mpet_1701
Transfer RNA biogenesis [BR:
mpi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Mpet_1701
Prokaryotic type
tRNA splicing ligases
Mpet_1701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ADN36454
UniProt:
E1RHR6
LinkDB
All DBs
Position
1735374..1736807
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AA seq
477 aa
AA seq
DB search
MLEGLNKISDIEWEVRKGYVDDMAVPGRIFLSEGLGENLEDGAVKQLANVATLPGIVKYS
LGMPDIHWGYGFPIGGVGAFDVENGIISPGGVGFDINCGVRLITTPLKKDEFSGIKRLIN
TLFSTVPTGVGNVAPKKFSDSELEDIMREGASWAVKEGYGMPDDVKSCEESGMMKEASTE
HVSTKARQRGRPQCGTLGSGNHFLEVQYAAEIMDDEAAKAFGIEKDQICFMIHCGSRGLG
HQVCTDHLGTIENATKKYGIKIPDRQLACAPVKSPEGEAYFGAMAASANYAWANRQMITH
MVREVIERDFGVDYNEMKLVYDVTHNVAKIETHVVDGKKMELCVHRKGATRAFGPGSPEI
PKDLSAIGQPVIIPGSMGTSSYLLKGTQTAMEKTFGSTCHGAGRLASRSSAKKSHSGADI
RQDLLDRGIFVRATSNKVIAEEAPEVYKPSSEVVDIVHRAGLSMKVARLEPIGVIKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaggactgaataaaatatccgatatcgaatgggaggtccgaaaaggttacgtg
gacgatatggcggtgccgggaaggatctttttatcggagggcctcggggaaaacctcgag
gatggcgcggtaaaacagctcgccaatgtcgcgacccttccgggaatagtaaaatattca
cttggaatgcccgacattcactggggctacgggttcccgataggcggtgtcggggcattc
gatgtcgagaacggaattatatctcccggcggtgtaggcttcgatataaactgcggcgtc
aggctgatcacgacacccctgaaaaaggatgaattttccgggatcaagagactgatcaat
acattgttctcgaccgttccaactggtgtcgggaatgtggccccgaaaaaattctcggac
agcgaactcgaggacatcatgagggagggtgcgtcatgggcggtgaaagagggatacgga
atgcccgacgacgtgaaatcctgcgaagagtccgggatgatgaaggaggccagcaccgag
catgtcagcacaaaggcgagacagcgcggcagaccccagtgcgggacactcggatcgggc
aaccacttcctcgaagtccagtacgcggcagagatcatggatgacgaagccgcaaaagca
ttcgggatcgaaaaggaccagatatgtttcatgatccactgcggttcaagagggctcggg
caccaggtctgcacggatcatctcgggaccatcgagaacgcgacgaagaaatacgggata
aagattcccgaccggcagctcgcatgtgcaccggtgaagagcccggagggagaggcgtac
ttcggggcgatggcagcctcggcaaattatgcgtgggccaacaggcagatgatcacccac
atggtgagggaggtcatcgaaagggacttcggcgtggactacaacgagatgaaacttgtc
tatgacgtaacccataacgtggccaagatcgaaactcatgttgtcgacggaaaaaagatg
gagctatgtgtccaccgcaagggcgccacgcgtgcattcggcccgggttcacctgaaata
cccaaagatctgagtgcgatcggacagcccgtgatcatcccggggagcatggggacgtcg
tcgtatctccttaagggaacgcagactgccatggagaagacgttcgggagcacatgccac
ggggcaggaaggctcgcgtcgagatcgagtgcgaagaagagccacagcggtgcggatatc
aggcaggacctcctcgaccgggggatcttcgtgagggcgacaagcaacaaggtgatcgcc
gaagaggcgccggaggtctataagccgagcagcgaagtggtggatattgttcacagggcc
ggcctgtcgatgaaggtggcaaggctcgaaccaatcggagtgattaaaggatga
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