Methanolacinia petrolearia: Mpet_1921
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Entry
Mpet_1921 CDS
T01312
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mpi
Methanolacinia petrolearia
Pathway
mpi03022
Basal transcription factors
mpi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mpet_1921
09124 Replication and repair
03420 Nucleotide excision repair
Mpet_1921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpi03021
]
Mpet_1921
03036 Chromosome and associated proteins [BR:
mpi03036
]
Mpet_1921
03400 DNA repair and recombination proteins [BR:
mpi03400
]
Mpet_1921
Enzymes [BR:
mpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mpet_1921
Transcription machinery [BR:
mpi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mpet_1921
Chromosome and associated proteins [BR:
mpi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mpet_1921
DNA repair and recombination proteins [BR:
mpi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mpet_1921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
DEAD
AAA_16
Rad17
nSTAND3
cobW
Motif
Other DBs
NCBI-ProteinID:
ADN36672
UniProt:
E1RJ02
LinkDB
All DBs
Position
1937987..1939993
Genome browser
AA seq
668 aa
AA seq
DB search
MYIMEGLKDWFPYESFRPYQEEMLNTAGLCAEEGRICLIDAPTGSGKSSVVSALLAKANG
KKIIIAVRTISQLNIFLRELELIKKKQSRLKVAYLVGKRNMCPMGIDGDVYRMCEGLKAF
SSSLMRDRAHKGSLMPAGDPVIKNQLKRQDRDHPLLCPYFIRSRVFIENDGLKMTPSNLL
RTKAEQVSKTLVPPEKIHEMCGELCPYEVMLQGARDADVILMNFHHLFSETIREQMYQSL
NIEPSQTILLIDEAHNCGDTIQSIQSVSINERTVELSQNELAHMRGRIGGVESIAAMLPQ
VTAFMESLKRSTKAEDWFDPVMFSKFLLRGSIYNRLDDIVDDLLRIYEAIREKKFQEGDF
REIPTERIMEFFLRILQAGTDPAYLSIYRKDEDVISLRVQNIDPSSTLRDIAGVHAAVIM
ISGTLSPVESFRKLYFRDADATTLSLPNAFPKKNRMVFCAGDITSAYSMRKDPDNHERIL
GYIRSFAGLKGNLAVYFPSYELLNIYSEDLPSKFNKKEVFIESQDTGTAAEDLKKFLSLP
DSGKSGIIFGVCGGKWSEGLDYRGELLNGALVIGLPLAPYNEVRRMIIQYFKNRFGEEGE
FISYTLPAINKALQALGRVLRTPDDRGVLVLGESRFLDKKIRKGLPEWMQEELIECNLSS
FTKDTERW
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtatataatggaaggtctgaaagactggtttccctacgaatcctttcgcccgtaccag
gaagagatgctgaatacggcagggctctgcgccgaagagggcaggatctgcttaatcgac
gcaccgacaggaagcgggaaatcgagtgtggtctccgcactactcgcaaaagccaacggg
aagaagataataatagccgtgaggacgatcagtcagctcaatatttttctgcgcgaactg
gaactcatcaaaaagaagcaaagccgcctgaaggtggcatatcttgtcgggaagagaaac
atgtgcccgatgggaatcgacggggacgtctacaggatgtgtgagggcctgaaggcattc
tcatcgtcgctgatgcgcgaccgtgcgcataaaggctccctgatgccggccggcgatccg
gtgattaagaatcagctcaagagacaggatcgcgatcatccactcctctgcccgtatttc
atcaggtcgagggtgttcatagagaacgacgggcttaagatgaccccttcgaatctcctg
aggacaaaggcggaacaggtatcaaagacactcgttcctcctgaaaagattcatgagatg
tgcggggagctatgcccgtatgaggttatgctccagggcgcaagggatgcagacgtcata
ctgatgaacttccaccatctcttcagcgagacgataagggagcagatgtaccagtcgctg
aacatagagccgtctcagacaattctgctgatagacgaggctcataactgcggagacaca
atccagagcatccagagtgtcagcataaatgaaagaacagtcgaactttcgcagaacgaa
ctggcacacatgagaggaaggatcgggggagtcgaatcgatcgccgcaatgctcccgcag
gtgaccgcattcatggagagcctgaagaggtcgacgaaggcggaggactggttcgatccc
gtaatgttctcgaagttcctcctaaggggatcgatctacaacaggctcgacgatatagtc
gacgacctcctgagaatctacgaggcaatcagggagaagaaattccaggaaggggatttc
agggagatcccgacagaaaggatcatggagtttttcctaaggatactccaggcgggaaca
gatcctgcatatctttccatctacagaaaagacgaagacgtaatctcgctgagggtccag
aacatcgatccgtcttcgacattaagggatatcgcaggcgttcacgcagctgtgataatg
ataagcggtacgttgtcgcctgtcgagagttttaggaaactgtatttcagggatgctgac
gcgactactctttctcttccgaacgcatttccgaagaaaaacaggatggtcttctgcgca
ggtgatataacatctgcttacagcatgaggaaagaccctgataaccacgaaagaattctt
ggttacatcaggtcttttgccggccttaaaggaaacctcgccgtctactttccgtcatat
gaactgctgaatatctactcggaagaccttccctcgaaattcaataaaaaagaggtgttc
atagaatcgcaggataccggcactgcagcagaagacctgaagaaattcctctcgctcccc
gactcaggcaaatcgggaattatattcggggtatgcggggggaaatggagcgaaggcctt
gattacaggggcgaacttttaaacggcgctcttgtaatcggccttccgcttgcaccgtac
aatgaagtcaggaggatgatcatccagtacttcaaaaacaggttcggggaagaaggcgag
ttcatatcatatacgctgccggcgataaacaaggcgcttcaggcgctgggccgggttctc
aggacacccgatgacaggggcgttcttgtcctcggtgaatcgagatttctcgataagaag
atcagaaaaggccttccggaatggatgcaggaagaacttatcgaatgcaacctctcatca
tttacaaaggatactgaaagatggtaa
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integrated database retrieval system
