Methanolacinia petrolearia: Mpet_2337
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Entry
Mpet_2337 CDS
T01312
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpi
Methanolacinia petrolearia
Pathway
mpi03420
Nucleotide excision repair
mpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mpet_2337
03430 Mismatch repair
Mpet_2337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpi03400
]
Mpet_2337
Enzymes [BR:
mpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mpet_2337
DNA repair and recombination proteins [BR:
mpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mpet_2337
MMR (mismatch excision repair)
Other MMR factors
Mpet_2337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
ADDB_N
AAA_11
AAA_30
Cas_Cas4
DUF2800
AAA_12
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ADN37084
UniProt:
E1RDA1
LinkDB
All DBs
Position
2335593..2338607
Genome browser
AA seq
1004 aa
AA seq
DB search
MTDENKFEPNQSQTEAIKGCGVQLVLAGPGSGKTRVITEKILHMIRENGAKPEEILALTF
SEKAAAEMAERLEKETDISRLTIATFHSFCLEVLEDNVLDTGISFNSGLISRTSQLIWGM
KSIDSFGFEAVEIGNNGPSVIESIIDGISRFRDELISAEDIEEYLEEKNAQETSADEDIY
LGKLSDLLKVYREYENYKRREELLDFDDMIHETVRLFRNKPDIRRQYENRFRYILVDEFQ
DTNYAQLELIKLLTSGHLCIVGDDDQSIYRFRGACEGNVDEFAGHFKDHKKVVLEENYRN
TGKILRVARQLIECADGSCTKNLRSNRGEGEPVIVAECSNENTEAGYVADEIESLMGEGF
LPGEIAILCRKRSECGKFHKILDSRNIPCEFTGDAEFFAIPVIKDAVSYLKAVANPAESA
IPLNRMMRQAGVSETAILEINTGAKQIRREGGKGDGVLEAMKRCGTEEDPDTIVIREVAE
NVDALSAARHKKTLPALVREIVLRTGKLYSKDREGVAALNRLYEIALEFSRINPSGEIGD
LLDHLSLLRDLSGDFGVNEKTGSGVRIMTVHQSKGKEFSAVFVTDLAERRFPLNYRSKPF
RVPVDLSKSIRPGDDEKELYKQEERRLLYVAMTRAKEKLYLTRAIRYGENKNDSKPSVFL
TEIDYLNNTDISIVSTDGGKNGKDNLISATGGPAEDPFSEENKLMKEAVAAIADKRYRSA
VGKILALEYVRSLDEGKEFDNREFLNIPFEKPAVPRRKPEPLIKPGDGTRLSASALKLYD
DCPLRFKFEKILRIPTEPRTYFSLGTTAHLIIEHLTKMKMGGETPSMEKAEDLLERFWSP
DAYSSQKHEREDRTRLIAHLNNYLEWEMNNPNIPVETEMEFEIRVLGTPFTGYIDRLERT
ESGGYAVVDYKTSKTPMSKNDAKEDIQLNLYALCVKEKTGSLPEKVSLFYLDKGKMVDYI
PDYESISAFLENAEPVIDRIFAGDFEPKESRNCLYCDYRILCGK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgaaaataaattcgaacccaaccaaagccagaccgaggcaataaaaggatgc
ggggtacagctcgtccttgccggtcccggatcaggaaagacacgggttatcaccgaaaag
atcctccacatgatcagggagaacggtgcaaagcccgaagagatcctcgcactcaccttc
tctgagaaggccgcagccgagatggcggaacggcttgaaaaagagacggatataagtcgg
ctgactatcgcaacattccattccttctgcctcgaagtcctcgaggacaacgtgctcgac
acgggaatttcattcaactcgggcctgatcagccggacaagccagcttatatggggaatg
aagagtatcgacagtttcgggttcgaagcggtggagatcgggaacaacggaccgtccgta
atagaatcgataatcgacggaatcagcagattcagggacgaactgatatcggcggaagat
atcgaagaataccttgaagaaaagaatgctcaggagacatccgccgacgaagatatttac
cttggaaaactctccgacctcctgaaggtctacagggagtacgagaattataaaagaaga
gaggagcttctcgatttcgacgacatgatccacgagacagtccgcctgttcaggaataaa
cccgacatcaggagacaatatgagaaccgcttcaggtacatccttgtcgacgaattccag
gacacaaattacgcccagctcgaacttatcaagctcctgacatcgggtcatttatgcata
gtcggcgacgacgaccagtcgatatacaggttccggggggcctgcgaaggaaatgtcgac
gaattcgccgggcatttcaaagatcacaagaaggtcgtactcgaggagaattacaggaac
acggggaagatcctgagggtcgcacgacagctgatcgaatgtgcggacgggtcatgcacc
aagaacctgagatcgaacagaggcgaaggagaacccgtaatagtcgccgaatgcagtaac
gaaaataccgaagcaggatacgtggccgacgagatcgaatcactaatgggcgaaggattc
ctcccgggggagatcgcaatactgtgcaggaagagatcggaatgcggtaaattccacaag
atcctcgacagcaggaacataccctgcgaatttacgggcgatgccgaattctttgcgatt
ccggtgattaaagacgccgtctcttacctgaaagcagtcgcaaaccctgccgaatcagcc
atcccgctcaacaggatgatgaggcaggcaggcgtatcggagacagcgatactggagatc
aataccggggcaaaacagatccggcgggaaggtggaaaaggcgacggcgttctcgaggcg
atgaagagatgcggcacagaggaagacccggatacgatcgtaattcgcgaggttgctgaa
aatgtcgatgcactctcggccgcaaggcacaaaaagacacttccggctcttgtccgcgag
atcgtcctccggacaggcaaattatacagcaaagaccgggagggcgtcgcggcattaaac
agactatacgagatagcacttgaattctcccggataaacccttcgggggagatcggcgat
ctgcttgaccacctctcgctgctgagagatctatcgggcgacttcggggtgaacgaaaag
accggatcaggcgtcaggataatgacggtccaccagagtaagggaaaggagttttcggcg
gttttcgtaaccgatctcgcggagcgccggttcccgttgaactacaggagcaagccgttc
cgtgttccggtggatctgtcgaagagcatccgtccgggcgacgacgagaaggagctttac
aaacaggaagaacgaaggctcctctatgtcgcgatgacaagagcaaaggagaagctctac
ctgacgcgtgcgataagatacggagaaaataaaaacgactcgaaaccatcggtattcctc
actgagatagactaccttaacaacacggacatcagcatcgtttcaacagacggtggaaaa
aacgggaaagataacctgatctccgcaacgggcggcccggcggaagatcccttctcagaa
gagaacaagctcatgaaagaggccgtcgcggcgatcgccgacaaaagatacaggtcggcg
gtcgggaagatactggcgctggaatacgtgcggagcctggatgaagggaaggagtttgac
aacagggagttcctcaatattccgtttgaaaaacctgctgtaccccgaaggaaacctgaa
ccgcttatcaaaccaggtgacggcaccaggctttccgcatccgcactgaaactatatgat
gactgtcctctcaggtttaaatttgaaaagatcctcaggataccgacggagcccagaacc
tacttcagcttggggacgactgcacacttaataatcgaacacctgactaagatgaagatg
ggtggagagactccttcgatggagaaagccgaagatcttcttgagagattctggtcaccg
gatgcatattcgtcgcaaaaacacgaacgagaggacagaaccagattgatcgctcatctt
aataactatctcgaatgggagatgaataatcccaatatccccgtcgaaacggagatggag
tttgagatccgggtactcgggactccttttacggggtacatcgacaggctcgaaaggacg
gagtcgggcggttatgcggtagtcgattacaaaacctccaaaacaccgatgtcgaagaac
gacgcgaaggaggacatccagctaaacctttatgccttgtgtgtgaaggaaaagaccggc
agcctcccggagaaggtctcgctcttctatcttgacaaaggaaagatggttgactatatt
ccagactacgaatcgatctccgcatttcttgaaaatgccgaaccggttatcgacaggatt
tttgcaggggacttcgaaccgaaagaatcacggaattgtttatactgcgattacagaatt
ctctgcgggaagtaa
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