Methylophaga pinxianii: LGT42_000110
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Entry
LGT42_000110 CDS
T08312
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
mpin
Methylophaga pinxianii
Pathway
mpin03030
DNA replication
mpin03430
Mismatch repair
mpin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGT42_000110 (ssb)
03430 Mismatch repair
LGT42_000110 (ssb)
03440 Homologous recombination
LGT42_000110 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpin03032
]
LGT42_000110 (ssb)
03400 DNA repair and recombination proteins [BR:
mpin03400
]
LGT42_000110 (ssb)
03029 Mitochondrial biogenesis [BR:
mpin03029
]
LGT42_000110 (ssb)
DNA replication proteins [BR:
mpin03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LGT42_000110 (ssb)
DNA repair and recombination proteins [BR:
mpin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LGT42_000110 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
LGT42_000110 (ssb)
Mitochondrial biogenesis [BR:
mpin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
LGT42_000110 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
DUF3127
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UPH45719
LinkDB
All DBs
Position
23627..24124
Genome browser
AA seq
165 aa
AA seq
DB search
MSVNKVILVGRLGVDPESRAFPNGGSICNLRIATSESWRDKQTGERQERTEWHRVVLRNK
LGEIAQQYLRKGSQVYIEGRIQTRKWQNQQGQDQYTTEIVGNEMTMLDSKGAGGGSNDNQ
DYGQGRPSQPAGKSNYNNPQPASASAGPDYGSGGEADYYDDDIPF
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaacaaagttattctggttggcagactcggggttgatcctgaaagccgggct
tttccaaatggtggctcgatctgtaatttgcgtattgcgacatcagaaagctggcgtgat
aaacaaaccggtgagcgccaggaacgcaccgaatggcatcgtgttgtgttacgtaacaaa
ctaggtgaaatcgctcagcagtatctgcgtaaaggttcacaagtttacattgaagggcgt
attcaaactcgtaaatggcaaaatcagcaaggtcaggatcaatacactactgaaatcgta
ggcaatgaaatgaccatgctcgacagtaaaggtgctggtggcggcagtaatgataatcaa
gactatggccaaggccgtccttcccaaccagccggaaaaagcaactataataatccacaa
cccgcctcagcctcagctggtccggattatggttcaggtggcgaagccgattattacgat
gatgatattccgttctaa
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