Methylophaga pinxianii: LGT42_000195
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Entry
LGT42_000195 CDS
T08312
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpin
Methylophaga pinxianii
Pathway
mpin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGT42_000195 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpin03019
]
LGT42_000195 (recQ)
03400 DNA repair and recombination proteins [BR:
mpin03400
]
LGT42_000195 (recQ)
Enzymes [BR:
mpin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGT42_000195 (recQ)
Messenger RNA biogenesis [BR:
mpin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LGT42_000195 (recQ)
DNA repair and recombination proteins [BR:
mpin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGT42_000195 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
HTH_40
RecQ_Zn_bind
Helicase_C
ResIII
VMAP-M0
DNA_pol_A_exoN
Sigma70_r4_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UPH45736
LinkDB
All DBs
Position
41912..44038
Genome browser
AA seq
708 aa
AA seq
DB search
MQHVGQPALEVLQNVFGYSAFRHNQQTIVDHVTTGGDALVLMPTGGGKSLCYQLPALIRP
GTGVVVSPLIALMQDQVMALQQLGVNAAFLNSSLSAAEAYAVEAQLEAGQIDLLYVAPER
LLNERTLAMLARIQISLFAIDEAHCVSQWGHDFRPEYQQLRILHERFPDIPRIALTATAD
KRTRAEIIEQLNLHDANVYLNSFDRSNIFYAIAEANQAKQQLWQFIESQHANDAGIVYCL
SRKKVEAIAEWLTDQGRVALPYHAGLSSEMRAKHQQRFLREEGVIIVATIAFGMGIDKPD
VRFVAHLNLPKNIEAYYQETGRAGRDGLPANAWMAYGLQDVITLRQFMQNSDAPDIIKRV
EHHKLDAMLGLCESISCRRHALLAYFDESSPETCGQCDNCQNPPEHFDATEVAQKALSCV
YRTDQRFGVNYLIDVLIGSDDERIKTNQHDQLSTFGIGSELTATQWRGIFRQLIATGHLD
IDINRYGALRLTEKCRAILRGEQKLLLRKQQAKQTLSKKEKKQASVRPQDQNLWEALRQL
RTEIAQQNGVPPYVIFHDSTLQEMCQTRPTDMQAMARISGVGAQKLEHYGQRFIAVIQQH
PLSELLNNGLRDTVNQTLILHEQGLSPDQIAKHRELKVSTIYSHLSDGIEAGLLDVKKVL
DLADNEFNEIISTIESLGDEADSLKAVFEALDEAYDYGVIRCVRASIY
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatgtcgggcaacccgcgctggaagtgttacaaaacgtttttggttacagcgct
tttcgtcataatcagcaaactatcgttgaccacgtaactaccggtggtgatgccctggtg
ttgatgccgaccggtggtggtaaatcactgtgttatcaactcccggcactgattcgcccg
ggaacaggagtggtagtttcaccattaattgccttgatgcaggatcaggtgatggcgttg
caacaactcggtgtgaacgcagcatttttaaattccagtttatcggctgctgaagcctat
gctgttgaagcacagcttgaagccggacagatagatttactttatgtggcacccgagcgt
ttattaaatgaacgcacgctggcgatgctggcacgaatacagatttcattgtttgcaatt
gatgaagcgcattgtgtgtcgcaatggggccatgattttcgcccggaatatcagcaactg
cgcattttgcatgaacgttttccagatattccgcgtattgccctgaccgccacggccgat
aaacgcactcgcgctgagatcatcgaacagctcaatctgcatgatgccaatgtctatctg
aacagctttgatcgcagcaatattttttatgccattgccgaagccaatcaggccaaacaa
cagctttggcagtttattgaaagccagcatgccaatgatgcggggattgtttattgcctg
tcacgtaaaaaggttgaggcaattgctgagtggttgaccgatcagggccgagtggccttg
ccctatcatgctggtttatcatcggaaatgcgtgctaagcatcagcaacggtttttacgc
gaagaaggcgtgattattgttgccaccatcgcgtttggtatgggtattgataaacccgat
gtgcggtttgtggcgcatttaaatctgccaaagaatattgaagcgtattatcaggaaacc
ggccgcgcaggtcgtgatggcttaccggccaatgcctggatggcatacgggctgcaagat
gtgattaccttacgtcagtttatgcaaaactctgatgcaccggacattattaaacgggtt
gaacatcataagctggatgccatgctgggcttatgtgaatccatcagctgccggcggcat
gccctgctcgcctattttgatgaatcgtcaccggaaacctgtggtcagtgtgataactgt
cagaacccgccagagcactttgatgccaccgaagttgcccaaaaggccttgtcgtgtgtg
tatcgcaccgaccagcgctttggggtgaattatttaattgatgtgttgattggcagcgac
gatgaacgcatcaaaaccaatcagcatgatcagctgagcacgtttgggatcggctccgaa
ctgacagcaacccagtggcgcggtatatttcggcaactcattgccaccgggcacctggat
attgatatcaatcgttatggcgccttacgcctgactgaaaaatgtcgggcaattctgcgt
ggtgagcaaaaattactgctgcgtaaacagcaagccaaacaaacgctgagcaagaaagag
aaaaaacaggccagtgtgcgtccacaggatcagaatttatgggaagcattacgtcagtta
cgaaccgagatcgcccagcaaaatggggtaccgccctatgtgatctttcacgattcaaca
ttacaggagatgtgtcagacccgccctactgatatgcaggccatggcacgtatttccggg
gttggcgctcagaaactggaacattacggtcaacggtttatagccgtgattcagcagcat
ccattatcagaattattaaataacggcttacgcgatacggtgaatcagacgttgatattg
catgaacaaggactgagccctgatcagatcgccaaacatcgtgagttaaaagtcagcacg
atatacagtcacctgtcagatggcattgaagccggactgctggatgttaaaaaagtgctg
gatctggctgataatgaatttaatgaaatcatctcgaccattgagtcacttggcgatgaa
gccgatagtttaaaagccgtttttgaagctttagatgaagcttatgattatggggtgatt
cgttgtgttagggcttctatttattaa
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