Methylophaga pinxianii: LGT42_000395
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Entry
LGT42_000395 CDS
T08312
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mpin01011
]
LGT42_000395
Enzymes [BR:
mpin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LGT42_000395
Peptidoglycan biosynthesis and degradation proteins [BR:
mpin01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LGT42_000395
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
UPH45774
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Position
81450..82886
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AA seq
478 aa
AA seq
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MSPLELDFSVLEDDSDVGPQTNDVWQRIRDGYGISDSLSLHPETQNRLSWFVSNPEYVDK
VVERSRPYLFYIVEELERRDMPLEIALLPIVESGYQPFALSSGQAAGIWQFIPATGRVFG
LEQNWWYDGRRDVIESTHAALDYLQKLHNDFNDWELALAAYNAGEGTVGRAIKKNQEAGL
PTDFWSLELPAETTAYVPKLLAVAQLVKQPAQYDLKLNPIANEPYMSVINVGSQIDLSLA
ADLADITLDELYLLNPGFNRWATAPQGPHKLVLPATKANNFKTALLDLSEEDRLRWKRHE
VKPGESLSSIASQHQTTINEIKKANKIKTNFIRAGAHLLIPISTAQADEAEANAIANRKL
QLGKKLNYAVKAGDTWWNIAKAYAVDVVDLTQWNNKKPSDVLHSGQKLVIWQPNQTASKL
KAINYTIRNGDSLWTISRKFNVTVDKVKEWNGLSDRTLLQPGQKLTLYVDPAIQISHS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ttgagccctcttgaactggatttttctgttttagaagatgattcggatgtagggcctcaa
accaatgatgtctggcaaagaattcgtgacggttatggaatctctgactctcttagcctg
catcctgaaacacagaaccggctcagctggtttgtcagtaatccggaatatgtcgacaaa
gtcgttgaacgctcacgtccatatcttttttatatagtagaagagctcgaacgtcgcgat
atgccattggaaattgccttgttgcctatcgtagaaagtggctatcaaccttttgcactc
tcatctggacaggctgcgggcatttggcaatttattcctgcaaccggtcgtgtttttggc
ctggaacaaaactggtggtatgacggacgccgcgatgtcattgagtccacacatgcagcc
ttggactacctgcaaaaacttcataatgattttaacgactgggagcttgcgttagccgct
tataatgcaggcgaaggtaccgttggtcgtgcgattaaaaagaatcaggaagcaggtttg
cccaccgacttctggtccttggaattacctgcagaaaccacggcttatgtgcccaagctt
ttagctgtagcacaattggtaaaacaacccgcccaatatgatctaaaacttaatcccatt
gcaaacgaaccctacatgagcgtgatcaatgtcggcagtcaaattgacttatcattggcc
gcggatctggcagatatcactttagatgaattatatcttttaaacccggggtttaatcga
tgggcaactgcgccgcaaggtccgcacaaattagtattaccggcaacaaaagcaaataac
ttcaaaactgcattattagatctctccgaggaagataggctgcgttggaagcgtcatgag
gttaaaccaggcgagtctctcagtagtattgcctcacaacatcaaacaaccattaatgaa
atcaagaaagcgaataaaatcaagacgaactttattcgtgctggtgcacatctgctaata
ccgatttctactgcacaagctgatgaagctgaagcaaatgcgattgcaaatcgcaaatta
cagcttggcaaaaaattaaattacgccgttaaagccggtgatacatggtggaatattgcc
aaagcttacgcagtagatgtcgtagatctgacacaatggaataacaaaaagccctcggat
gtcttacactctgggcagaaattggttatctggcagcccaatcaaaccgcttcaaaactg
aaagccattaactacactattcgtaacggtgattcactttggaccatttcccgcaaattt
aacgttacggttgataaagtgaaggaatggaacggattaagtgatcggaccttattgcaa
cccggacagaaattaacactgtacgttgatcctgcaattcaaatcagtcatagctaa
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