KEGG   Methylophaga pinxianii: LGT42_001625
Entry
LGT42_001625      CDS       T08312                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
mpin  Methylophaga pinxianii
Pathway
mpin02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mpin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LGT42_001625
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:mpin02022]
    LGT42_001625
Two-component system [BR:mpin02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   LGT42_001625
SSDB
Motif
Pfam: Response_reg Sigma54_activ_2 Sigma54_activat HTH_8 BRCA2DBD_OB2 AAA_16 UPF0175
Other DBs
NCBI-ProteinID: UPH46006
LinkDB
Position
complement(326961..328235)
AA seq 424 aa
MSTEKPLILVVDDEPDIRELIKDILEDEAYRVVTASNGEEARLVFTQNQPQLVLLDIWMP
DVDGISLLKEFKQQNAGVTIVMMSGHGTIETAVEATRSGATDFIEKPLSMAKLLRAVELA
IENRAKQAAQRHEFALEPVGKSAKLTQLREQAERVAGHEMPILLMGEGGTGKHCFAYYLH
RLGLYSGGKFIEVSPESFPLDSHKLVSLAQNNTLYINDVALLSDEAQALLQHLLESGRMK
DCQLICATQLGLDKVIARGDFSEGLFYQLNTITLQIPSLRDHVEDIPELVHFFVDQQTTQ
ADLPYRRFTVAAQNRLRNYAWPGNVLELKNVIQRLLVLGDSDDIDVDDVESALQAEQPPQ
ADDVTGINFDQPLREAREQFERIYLLQKLQETDGNVGKAAKLAGMERTHLYRKLRALGID
SKQV
NT seq 1275 nt   +upstreamnt  +downstreamnt
gtgagtactgaaaaaccacttattttagttgtagacgatgagcccgatattcgtgagctt
atcaaagatattctcgaagatgaggcctatagggttgtcaccgcgagtaatggagaagag
gcgcgcctggtttttacacaaaatcaacctcaactggtcttgttggatatctggatgcca
gacgttgacggtattagcctgctcaaggaatttaaacaacaaaatgctggcgtaacaatc
gtgatgatgtctggccatggcactatcgaaaccgccgtggaagccactcgctcaggggca
accgactttattgaaaaaccgttatcgatggcgaagttattacgtgctgtagagttagcc
attgaaaaccgagccaaacaagcggctcagcgtcatgagtttgccctggaacctgtcggt
aaaagcgccaaattaacccagcttcgtgaacaggccgagagggttgctggtcatgaaatg
ccgattttactcatgggcgaaggcggtacaggtaaacattgttttgcctactacttgcat
agattaggtctttatagtggcggtaaatttatcgaggtcagcccggaaagctttccgctg
gatagccataaactggtctcactggcacaaaataataccctgtacattaacgatgtagcg
ctgctcagtgatgaggcacaagccctgctgcagcacttgctggaaagtggtcggatgaaa
gactgtcagttgatctgtgcaacgcaactggggttggataaagtgatagctcgcggcgat
tttagtgaaggtttgttttatcaactgaataccatcactctgcaaataccgtctctgcgc
gatcatgttgaagatatccctgaactcgttcatttctttgttgatcaacaaactacccag
gccgatctgccttatcgtcgcttcactgttgccgcccaaaatcgtctgcgaaactacgca
tggccaggcaatgtgttggaactaaaaaatgtcatccaacgtctgctggtattaggtgat
tctgatgatattgatgtcgatgatgtggagtctgcacttcaagccgagcaaccacctcag
gcagatgatgtaaccggtattaattttgatcagccgttacgcgaagcacgtgagcagttt
gaacgaatttatttgctgcaaaaactacaggaaaccgatggtaacgtgggcaaagccgca
aaattagcgggtatggagcgcacccatctttatcgaaaactacgagcacttggcattgat
agtaaacaagtttaa

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