Methylophaga pinxianii: LGT42_002720
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Entry
LGT42_002720 CDS
T08312
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpin03016
]
LGT42_002720 (miaB)
Enzymes [BR:
mpin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LGT42_002720 (miaB)
Transfer RNA biogenesis [BR:
mpin03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LGT42_002720 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
CodY
DUF7610
Motif
Other DBs
NCBI-ProteinID:
UPH47085
LinkDB
All DBs
Position
566414..567754
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AA seq
446 aa
AA seq
DB search
MAGKLFIRTFGCQMNEYDSNKMAEVLAASHQLETTDIAEEADVLLLNTCSIREKAQEKVF
HQLGRWKRWKDKKPHLVIGVGGCVASQEGEAIRKRAPYVDLIFGPQTLHRLPTMLDDVRK
NNKPEIDISFPEIEKFDNLPAPKADGPTAFVSIMEGCSKYCTFCVVPYTRGEEVSRPVGA
VLREIRQLAAQGVREVNLLGQNVNSYRGIIEDDETADLALLIHYVAAIEGIERIRFTTSH
PVEFSDSLIEAFAEVPELVNHLHLPVQSGSDRILAMMKRGHTVAQYIEKIERVKKIRPNL
SLSSDFIVGFPNETEDDFNATMALINQIGFDHSFSFIYSARPGTPAAMFNDSVSDEEKKH
RLQIMQDRLRELEDAVSDSMIGTVQRVLVERAAHRDAAEIAGRTENNRVVNFPGDMALVG
KFVDVRITEAHTNSLRGELLADSVIL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaactttttatcagaacctttggttgccagatgaacgagtacgactcgaac
aagatggccgaagtgcttgctgcgtcacatcaattggaaaccaccgacatcgctgaagag
gccgatgtactgttgttgaatacatgttcgatccgtgaaaaagcccaggaaaaagttttc
catcaactgggccgctggaagcgctggaaagataaaaaaccgcatctggtgattggcgtt
ggcggttgtgttgccagccaggaaggtgaagcgattcgtaaacgtgcgccgtatgtggat
ctgatttttgggccacaaaccctgcatcgtctgcccaccatgttggatgacgtccggaaa
aataataaaccggaaattgatatctcctttccggaaatcgaaaagttcgacaacctgcct
gccccgaaagccgatggcccgacagcgtttgtctctattatggaaggttgcagcaagtac
tgtaccttctgcgtcgtaccttacacccggggtgaagaagtgagtcgcccggttggtgct
gtattacgtgaaattcggcagctggctgcgcagggtgtacgtgaagtcaatctgttagga
caaaatgtaaattcctatcgcggtattattgaagatgatgaaactgctgatctggcgtta
ttgattcactatgtcgcggcaattgaaggtattgagcgaattcgctttactacttcacat
ccggtggagttttccgattcattgattgaggcgtttgccgaagtcccggaattggtcaat
cacctgcatttgccagtgcagtcagggtctgatcgcattctggcgatgatgaaacgtggt
cacactgttgcacaatatattgagaaaattgaacgggtgaaaaaaatccgccccaacctc
agcctgtcgagtgattttattgtcggatttccaaacgagacggaagatgactttaatgcc
accatggcattgatcaatcaaatcggttttgatcattctttcagctttatttatagcgca
cgtcctggtacaccggccgcgatgtttaacgattcagtgtctgatgaagagaaaaaacat
cgtctacaaatcatgcaggatcggttgcgtgaactggaagatgccgtgagtgattcgatg
atcgggacggtgcaacgagtattggtcgagcgggccgctcaccgagatgcggccgaaatt
gccggcagaactgaaaataatcgggtagtcaatttccccggtgatatggcgctggtgggc
aagtttgtcgacgtgcgaattactgaagcgcacaccaactccttgcgaggagaacttctt
gctgatagcgttatcctctaa
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