Methylophaga pinxianii: LGT42_003405
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Entry
LGT42_003405 CDS
T08312
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mpin
Methylophaga pinxianii
Pathway
mpin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LGT42_003405 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpin03019
]
LGT42_003405 (orn)
03009 Ribosome biogenesis [BR:
mpin03009
]
LGT42_003405 (orn)
Messenger RNA biogenesis [BR:
mpin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LGT42_003405 (orn)
Ribosome biogenesis [BR:
mpin03009
]
Eukaryotic type
Pre-60S particles
RNases
LGT42_003405 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UPH46339
LinkDB
All DBs
Position
complement(711872..712423)
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AA seq
183 aa
AA seq
DB search
MAKSKHNLIWIDLEMTGLDTNNDYIIEIATIVTDSELNILAEGPIIAIHQPDTILAGMDE
WNTKQHGGSGLTERVRSSVVSVEQAEQETLEFLKKHVPAGISPMCGNSICQDRRFMARLM
PELEAYFHYRNLDVSSFKEIARRWAPKVEKSFKKKSSHLAMDDIKDSIRELQHYREHMIK
VPE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagcaaacataacctgatctggattgacctggagatgaccggtctcgatacc
aataacgactatattatcgaaatcgccacaattgtcactgacagcgaactgaatattttg
gcagaaggccccatcattgcgattcatcaaccagacacgattctggcgggcatggatgaa
tggaacaccaaacaacacggtggttcaggtctcaccgaacgggttcgaagcagtgttgtc
tccgttgaacaggctgagcaggaaacactggaatttctgaaaaaacatgtgcctgcgggt
atttcccctatgtgcggcaacagcatctgtcaggatcgtcgttttatggcgcgcttgatg
cccgaattggaagcctattttcattatcgcaatctggacgtcagcagtttcaaggaaatc
gcgcgtcgctgggcacctaaagttgaaaaatcgttcaagaaaaaatcatcccatctggcg
atggatgatatcaaggactcaattcgcgaactgcaacactatcgcgagcatatgatcaaa
gtgccagaataa
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