Methylophaga pinxianii: LGT42_005505
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Entry
LGT42_005505 CDS
T08312
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mpin
Methylophaga pinxianii
Pathway
mpin00220
Arginine biosynthesis
mpin00240
Pyrimidine metabolism
mpin00250
Alanine, aspartate and glutamate metabolism
mpin01100
Metabolic pathways
mpin01110
Biosynthesis of secondary metabolites
mpin01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LGT42_005505 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LGT42_005505 (carB)
00220 Arginine biosynthesis
LGT42_005505 (carB)
Enzymes [BR:
mpin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LGT42_005505 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UPH46742
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All DBs
Position
1131692..1134910
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AA seq
1072 aa
AA seq
DB search
MAKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNM
ADATYIEPVTWEAVSKVIEVERPDAILPTMGGQTALNCALALEKHGVLEKYGVEMIGADS
EAINKAEDRDLFRAAMRKIGLDMPQSDIAHSLEEALEVQQKFGFPVIIRPSFTMGGSGGG
IAYNREDFVDICQRGLYLSPTSELLIEESIIGWKEYEMEVVRDKKDNAIIICSIENFDAM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPETGRLIIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGGATPASFEPSIDYVVTKVP
RFTFEKFPLADNRLSTQMKSVGEVMAIGRNFQESLQKALRGLEIDRDGFNEILDLKAENT
AEVLRRELSLPGSDRLWYVGDAFRFGMSFEEVQQLTHIDPWFLIQIQELVEIENQLKERS
LNDIDEAEMRSLKRKGFADSRLAKLLHKTEKQFRSHRQAMGVRPVYKRVDTCAAEFSTST
AYMYSTYDEECEANPTDRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNC
NPETVSTDYDTSDRLYFESLTLEDVLEIVALEKPKGVIVQFGGQTPLKLARALEAAGVPI
IGTSPDAIDHAEDRERFQQMVEKLGLLQPPNRLAHSVDTAVSLAAEIGYPLVVRPSYVLG
GRAMEIVYNEEELQRYMLTAVSVSNDSPVLLDRFLDDAIEVDVDAICDGKEVLIGGIMEH
IEQAGVHSGDSACALPPYSLSQEVMDQLRIQVKQMAIELGVVGLMNTQFAIQGDRIFILE
VNPRASRTVPYVSKAIGVPLAKVAARCMAGMSLAEQGVTKEVIPSYYSVKEAVFPFIKFQ
GVDPILGPEMKSTGEVMGVGRTFGEAFAKSQLAASVSLPVGGKAFISVRDADKQAVIKIA
QDLLGLGFSLLATRGTQQTLIDADVPCERVKKVAEGQPHIVDMIKNDEIALIVNTTEGRQ
AVADSREIRRAALQHQVNYTTTLAAARATILALNCEDSVSVNRLQSLHGELN
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgtactgatattcaaagcattctgattctgggtgctggtccgattgttatc
ggtcaggcctgcgaatttgattattctggcgcacaggcttgtaaagctctgcgggaagaa
ggttatcgcgtcattctggtcaactccaacccggccaccatcatgactgatcctaatatg
gccgatgcgacttatattgagcctgttacctgggaagcagtcagcaaggtgattgaagtt
gagcgtcccgatgccattctgccgaccatgggcgggcaaaccgcgttgaactgtgcgttg
gccctggaaaaacatggcgtactggaaaaatatggtgtcgagatgatcggtgctgacagc
gaagccatcaataaggctgaagaccgtgacctgttccgtgcggcaatgcgcaaaattggt
ctcgatatgccgcaatcagatatcgctcactcgcttgaagaagctctggaagtccaacag
aaattcggcttcccggtcattattcgtccttcctttaccatgggcggcagtggcggtggt
atcgcctataatcgtgaagattttgtcgacatttgccaacgcggcttgtatctgagccca
acatccgagttattgattgaagagtcgatcattggctggaaagagtatgaaatggaagtg
gtacgcgataaaaaagataacgcgatcattatctgttccattgaaaactttgatgcgatg
ggggtgcataccggcgattccattactgtggcgccagctcagacactgaccgataaagaa
tatcaaatcatgcgtaacgcttcattggcggtattacgtgagattggtgtcgaaacaggt
ggttcaaacgtacagtttgcggtcaaccctgaaaccggccgtttgattattatcgaaatg
aatccacgggtttcccgttcatctgcattagcttccaaagccaccggttttccgattgcc
aaagtggctgccaaactggcagtaggttacacgctggatgaattgcaaaatgaaatcacg
ggtggagccacaccggcgtcatttgagccgagtattgattatgtggttacgaaagtgccc
cgttttacttttgaaaaatttccattggccgataatcgcctgagcactcagatgaaatct
gtcggcgaagtgatggctattggccgcaattttcaggagtctttgcaaaaagctctgcgc
ggtctggaaatcgatcgtgatggttttaacgaaattctcgatctcaaagcggaaaatact
gctgaagtattacgtcgcgagttgagtttaccaggatctgaccgtctatggtacgtgggt
gatgccttccggtttggcatgagtttcgaagaagttcagcagctgacgcatattgatcca
tggtttctgatacagattcaggagctggttgagatcgaaaatcagcttaaagagcgttca
ctgaacgatatcgacgaagctgaaatgcgatcattgaaacgtaaaggttttgcggattca
agactggcaaaactgctacataaaaccgaaaagcaattccgtagccatcgccaggcgatg
ggtgtacgtccggtatataaacgcgtagatacctgtgctgcagagttctcaacatctacc
gcgtatatgtattccacttacgatgaagagtgcgaagccaacccgaccgaccgagacaag
atcatgattttaggtggtggtccaaaccgtattggtcagggtattgaatttgattactgt
tgtgttcatgcggcactggcattgcgcgatgatggttatgaaaccatcatggtcaactgt
aatccggaaactgtttccaccgattacgatacttctgatcgtctttattttgagtcattg
acgctggaagatgttctggaaattgttgccctcgaaaaacctaaaggcgtaattgttcaa
tttggtgggcagacaccgctgaaactggcccgagctcttgaagctgccggtgtgccgatt
attggtacttctccggatgcgatcgatcatgcggaagatcgcgaacggttccagcagatg
gttgaaaaactgggtttattgcaaccacctaatcgtttggctcattcggttgatacagct
gtttccctggccgccgagatcggttatccattagtagttcgtccttcttatgtgttgggc
ggccgggcgatggaaattgtctataacgaagaagaactacaacgctatatgttgaccgcc
gtgtcggtttccaatgattctccggtgttgctggatcgtttcctggatgatgctattgaa
gtcgatgtggatgccatctgtgatggtaaggaagtattgattggcggcatcatggagcac
attgaacaagctggtgttcattcaggtgactcagcctgtgctttaccgccttacagcctt
agccaggaagtcatggatcagttacggatccaggtgaaacagatggcgattgagctgggt
gttgtcggactgatgaatacacagtttgccattcagggtgatcgcatctttattctggaa
gttaatcctcgtgcttctcgtactgtaccttatgtttcaaaagccatcggtgtgccgtta
gcaaaagttgcagcgcgttgcatggctggtatgagcttggcagagcagggtgtcactaaa
gaagtcatcccatcttattactctgtaaaagaagctgtgttcccattcatcaagttccag
ggtgtcgatcctattctgggacctgaaatgaaatcgactggggaagtgatgggcgttggc
cgtacgtttggtgaagcctttgccaaatcacagctggccgcttcagtcagcttgcctgtt
ggaggcaaggcatttatctcggtgcgcgatgcagataagcaagcggttatcaagattgct
caagatttgttaggcttaggcttttcgttgctggccactcgtggcactcaacaaacgctg
attgatgccgatgttccttgtgagcgagtcaagaaagtcgcagaaggccagccgcatatt
gttgatatgattaaaaacgatgaaattgcgctgattgtgaatacaacagagggtcgtcag
gctgttgcggattccagagagatacgccgcgcagcattgcagcatcaggtcaattacacc
accacacttgctgctgcccgtgccacgattttggccttgaactgtgaagacagcgtatcg
gtgaatcgtttacagtcattacatggagaattgaattaa
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