Methylophaga pinxianii: LGT42_007015
Help
Entry
LGT42_007015 CDS
T08312
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mpin
Methylophaga pinxianii
Pathway
mpin00260
Glycine, serine and threonine metabolism
mpin00460
Cyanoamino acid metabolism
mpin00630
Glyoxylate and dicarboxylate metabolism
mpin00670
One carbon pool by folate
mpin00680
Methane metabolism
mpin01100
Metabolic pathways
mpin01110
Biosynthesis of secondary metabolites
mpin01120
Microbial metabolism in diverse environments
mpin01200
Carbon metabolism
mpin01230
Biosynthesis of amino acids
mpin01240
Biosynthesis of cofactors
mpin04981
Folate transport and metabolism
Module
mpin_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LGT42_007015
09102 Energy metabolism
00680 Methane metabolism
LGT42_007015
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LGT42_007015
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LGT42_007015
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LGT42_007015
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LGT42_007015
Enzymes [BR:
mpin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LGT42_007015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
DegT_DnrJ_EryC1
Poly_A_pol_cat
Motif
Other DBs
NCBI-ProteinID:
UPH47109
LinkDB
All DBs
Position
1450524..1451762
Genome browser
AA seq
412 aa
AA seq
DB search
MSIADFDDELFQAISAEEQRQEDHIELIASENYTSPRVMEAQGSLLTNKYAEGYPGKRYY
GGCEHVDTAEDLAIERAKALFGADYANVQPHSGSQANAAVYLALLQPGDTILGMSLAHGG
HLTHGAKVSASGKIYNSVAYGISSDSGEIDFNEVEKLAKEHQPKMIVAGFSAYSRIIDWQ
KFRDIADSVGAYLLVDMAHVAGLVAAGLYPNPVQIADVTTTTTHKTLRGPRGGLILAKSN
PEIEKKLNSAVFPGFQGGPLMHVIAAKAVAFKEAMLPEFKTYQQQVVKNAQAMAKVFMAR
GYDVVSKGTDDHLFLVSFIEAGLTGKEVDAWLGDAHITVNKNAVPNDPQSPFVTSGIRVG
TPAVTTRGFSEQDCTDLAGWMCDVIDSHGDEKVIAAIRIKVTEICKRLPVYS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgctgattttgatgacgagttatttcaagccatttcagctgaagaacaacgt
caggaagatcatattgaattaatcgcttctgagaactataccagcccacgggtgatggaa
gctcagggctcattgttaaccaacaaatacgcagaaggttatcccggtaaacgttattat
ggcggttgtgaacatgttgataccgcagaagatctggcaatcgaacgcgcaaaagcttta
ttcggcgcagattatgccaacgtacaaccccactcaggatcgcaagccaatgctgctgtt
tatctggctttattgcaaccgggggataccattcttggaatgagcttggcgcatggtggg
catttgacacacggtgctaaagtcagtgcatctggaaaaatctataattctgttgcttat
ggtatcagcagtgattccggtgaaatcgatttcaatgaagtcgaaaaactagccaaagaa
catcagcccaaaatgattgtcgccggtttttcagcttactcgcgcattatcgattggcaa
aaattccgcgatatagccgattcagttggagcttatctactggttgatatggctcatgtt
gccggtttagtggcagcaggactctatccaaatccggtgcagatcgccgatgtaaccact
accacgactcataagacattaagaggtccacgtggtggtttgattctggctaaatcgaat
cctgaaatcgagaaaaaactcaactctgccgtcttcccgggttttcagggtggcccgttg
atgcatgtgattgcagcgaaagcggtcgcgtttaaagaagcaatgttgcctgagttcaag
acctatcagcagcaagtagtcaagaatgcacaagccatggccaaagtatttatggctcgt
ggctatgacgtcgtctccaaagggaccgatgatcatttgtttttggtcagttttattgaa
gccggattaaccggtaaagaagttgatgcctggttgggagacgcacatatcactgtcaat
aaaaatgcagtgcctaacgatccgcaatcgccttttgtgacctccggtatccgcgttggt
acacctgctgtcactacgcgtggcttcagcgaacaggattgcactgacctggcaggctgg
atgtgtgatgtgattgacagtcacggtgatgaaaaagtaattgctgctattcggatcaag
gtgacggaaatctgcaaacgtctgccggtttactcataa
DBGET
integrated database retrieval system