Methylophaga pinxianii: LGT42_007415
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Entry
LGT42_007415 CDS
T08312
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpin03016
]
LGT42_007415 (truA)
Enzymes [BR:
mpin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LGT42_007415 (truA)
Transfer RNA biogenesis [BR:
mpin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LGT42_007415 (truA)
Prokaryotic type
LGT42_007415 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UPH44355
LinkDB
All DBs
Position
1537425..1538204
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AA seq
259 aa
AA seq
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MRLALGVEYDGSQFHGWQFQPGQRTVQGELQKAVSLIANSPTEVFAAGRTDTGVHALNQV
VHFDTDAIREQRNWLLGLNSNLPHDVCVKWVRSVPEEFNARFSAVKRRYRYLILNRDSRS
SVHHQRMWWVYKSLDENKMQLAANLLLGQHDFSAFRAQECQAKSPIKTLDKLIVTRRDDC
IAVDVEARSFLHHMVRNLLGVLVPVGEGKQPVDWAKQVLLSQDRNLAGVTAPPQGLYLTD
VIYPDEFFLPAVSGFPVLW
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgagattagcattaggtgtcgaatatgacggcagtcaatttcacggatggcaatttcaa
ccgggacagcgcaccgttcaaggcgaattgcaaaaagccgtttcactgattgccaattcc
ccaacagaagtgtttgctgcaggtcgcacggataccggtgttcatgcattaaatcaggta
gtacattttgatactgatgccatacgcgagcagcgcaactggttattgggattgaactcc
aaccttccacatgatgtatgtgtgaaatgggtcagatctgttccagaagagttcaatgcg
cgctttagtgcggtcaagcgccgttatcgttacctaattctcaatcgagacagtcgttcc
agtgtccatcatcaacgcatgtggtgggtctacaaatcactcgatgaaaacaagatgcaa
cttgccgctaacttgttgcttggccagcatgatttttcagcctttagagcgcaggaatgt
caggcgaaaagtccgataaaaacgcttgataaattaattgttacacgccgggatgattgc
atagcagttgatgttgaagccagatcatttttacatcacatggtacgaaacttattaggc
gttctggtgccggtaggcgagggcaaacaacccgttgattgggcgaaacaagttttgctt
agtcaggatcgcaacttggcgggcgtaacggcaccaccacagggtctttatctcacggac
gttatttatcccgatgaatttttcctgccagcagtgtcaggttttccagtgctctggtaa
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