Methylophaga pinxianii: LGT42_007445
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Entry
LGT42_007445 CDS
T08312
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mpin
Methylophaga pinxianii
Pathway
mpin00061
Fatty acid biosynthesis
mpin01100
Metabolic pathways
mpin01212
Fatty acid metabolism
mpin02024
Quorum sensing
mpin04146
Peroxisome
Module
mpin_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LGT42_007445
00071 Fatty acid degradation
LGT42_007445
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LGT42_007445
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGT42_007445
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mpin01004
]
LGT42_007445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpin04147
]
LGT42_007445
Enzymes [BR:
mpin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LGT42_007445
Lipid biosynthesis proteins [BR:
mpin01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LGT42_007445
Exosome [BR:
mpin04147
]
Exosomal proteins
Exosomal proteins of breast milk
LGT42_007445
Exosomal proteins of breast cancer cells
LGT42_007445
BRITE hierarchy
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
UPH44361
LinkDB
All DBs
Position
complement(1543092..1544897)
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AA seq
601 aa
AA seq
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MTSQDYISPDKAQTLYGLFCERVKRSPDNEAYGYFDNESKQWQTLSWQNVADQVYLWQQA
LQQENLRKGDRVALNLRNSKEWIFFDLAALSLGLVVVPLYPDDRPDNVAYILQDADVRLL
LLNNLKQWQAIKAVLPEEHSLNRIIILHDESAENELPLTTLADWLTQTDNDIALSPAAPD
QLASIIYTSGTTGRSKGVMLSHQNMLSVAYGSLQFFEILPNDIFLSFLPLSHTLERTGGY
YLPMMAGSKVVFSRSIPLLADDMRQVKPTIMIAVPRIFERIYDRVHKQLSESSWIRRLIF
KAAVNVGWKRFQYQQGRKYWFPSILLWPLLNKLVVRRFHQRLGGNLRLAVTGGAALPSYA
AKMFIGLNLTLLQGYGLTETSPVISVNDPSSNDPASVGRPIKGVEVRIGQQDELEVKGPG
NMLGYWNNHKATSQVIDADGWLHTGDKARISESGHIYIVGRIKDILVLNNGEKVPPGDIE
AAIISNGLIEQALVLGEGRPYLAALLVINGEKWPQIAQQLGLDPLLMDSLDSKVLQHYFI
KLLRQWLFEFPAYARIRRVYLTLQPWTLENGLLTPTLKVKRALVLEKFDRQIQALYSDAS
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacctcacaggattatatttcacctgacaaagcgcagacgctctatggattattttgt
gaacgggtgaagcgcagccctgacaacgaggcttatggctattttgataatgagagcaaa
cagtggcaaacactgagttggcagaatgtggcagatcaggtttatttatggcaacaggct
ttgcaacaggaaaatctgcgtaaaggggatcgggttgcactgaatttacgaaatagcaaa
gagtggatattttttgacttggctgccttgagtctggggttagtggtagtccctctttat
cctgatgatcgtcccgataatgttgcttatattctgcaggatgctgatgtccgtttgttg
ttattaaataacctcaaacagtggcaagcgattaaagccgtattgccagaggagcatagt
cttaatcgtattattatcctccatgacgagtctgccgagaacgagttgcctttgaccacc
ttagctgactggcttacacaaactgataatgatattgctctctctcctgctgcaccggat
cagttagcctccattatttatacctcaggcactactggacgatccaaaggtgtgatgctc
agtcatcaaaatatgctttctgtcgcctatggttcactacaattttttgaaattttaccg
aacgacattttcttatcctttctgcctttgtcacatactctggaacgtactggtggatac
tatctgccaatgatggccggctcgaaagtagtgttttctcgcagcatccctctgctggcc
gatgatatgcggcaagtaaaacccaccatcatgattgccgtgcccaggatttttgaacgg
atttatgatcgagtccacaaacaactctcagaaagcagctggatcagacgtttaattttt
aaagctgcagtaaatgtcggctggaagcgttttcagtaccagcaaggtcgaaaatactgg
tttccttccatcttgttgtggccattattaaataaactggtggtgcgcaggtttcatcaa
cggcttggcgggaacctgcgcttagccgttactggaggtgccgccctgccttcctacgct
gctaagatgtttatcggcttgaacctaaccctactccaaggctacgggcttactgaaacc
agtccggttatcagtgtgaacgacccatcaagcaatgatccagcaagtgtgggtcgtcca
atcaaaggcgtggaagttcgtatcggtcaacaagacgaactcgaagttaaaggcccaggc
aatatgctgggctattggaataatcataaagccacgtcccaggtcattgatgcagatggt
tggttgcataccggagataaagctcgaatcagtgaaagcgggcatatttatattgtgggc
cgcattaaagatattctggtgcttaataacggtgagaaagtcccgccgggtgacatagaa
gcagcaattatcagcaatggtctgattgagcaggctttggtgttaggtgaggggcggccc
tatcttgcggcattattagttataaatggcgaaaaatggccgcagattgcgcaacaactt
ggtttggatcctttgttaatggatagcttagatagcaaagtacttcagcactattttatt
aagttattaagacaatggttatttgaatttccggcctatgcccgaattcggcgggtgtat
ctgacattgcaaccatggacgctcgaaaacggtttgctcactcccacattaaaggttaag
cgagctttggtactggaaaaatttgataggcaaatccaggcactttatagcgacgcatca
ggctga
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